RNA id: TU8914


Basic Information

Item Value
RNA id TU8914
length 200
lncRNA type inter_gene
GC content 0.40
exon number 2
gene id G7268
representative True

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 42264690 ~ 42264977 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

TAATACCCGAGTGACGCGACgactttaccaattgacgaTTGGCGATTTTTGAGATATCGTAGTTGGAGTTCGTTCACTTTGTATCTAAATCTGTGACAGACGCGGCCCAGAGCACAATGACAGCACATTAGTAATGCTAACGTCAGCGCCGTGGCACTGAACCGGCATCTTATTATAGTTCAAGTTATGTATtatacaga

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU8905 lncRNA downstream 44506 42219958 ~ 42220184 (-) True G7259
TU8884 lncRNA downstream 175063 42087804 ~ 42089627 (-) True G7243
TU8863 lncRNA downstream 197026 42066598 ~ 42067664 (-) True AMCG00004302
TU8816 lncRNA downstream 239950 41985243 ~ 42024740 (-) True G7192
TU8752 lncRNA downstream 621964 41623932 ~ 41642726 (-) True G7148
TU8916 lncRNA upstream 47942 42312919 ~ 42313118 (-) True G7270
TU9007 lncRNA upstream 427777 42692754 ~ 42719691 (-) True G7335
TU9010 lncRNA upstream 460935 42725912 ~ 42737850 (-) True G7336
TU9118 lncRNA upstream 970841 43235818 ~ 43237610 (-) True G7419
TU9175 lncRNA upstream 1137976 43402953 ~ 43428586 (-) True AMCG00004336
AMCG00004307 mRNA downstream 114515 42118653 ~ 42150175 (-) True AMCG00004307
AMCG00004306 mRNA downstream 156091 42101689 ~ 42108599 (-) True AMCG00004306
AMCG00004302 mRNA downstream 197520 42064989 ~ 42067170 (-) False AMCG00004302
AMCG00004290 mRNA downstream 791650 41469364 ~ 41473040 (-) True AMCG00004290
AMCG00004288 mRNA downstream 822506 41438900 ~ 41442184 (-) True AMCG00004288
AMCG00004310 mRNA upstream 68247 42333224 ~ 42336612 (-) True AMCG00004310
AMCG00004311 mRNA upstream 90574 42355551 ~ 42361988 (-) True AMCG00004311
AMCG00004312 mRNA upstream 99790 42364767 ~ 42366935 (-) True AMCG00004312
AMCG00004313 mRNA upstream 112821 42377798 ~ 42531006 (-) False AMCG00004313
AMCG00004316 mRNA upstream 375432 42640409 ~ 42660607 (-) True AMCG00004316
TU8320 other downstream 2415567 39841935 ~ 39849123 (-) True G6792
TU7893 other downstream 4895868 37367985 ~ 37368822 (-) True G6441
TU7345 other downstream 6850244 35354621 ~ 35414446 (-) False AMCG00004143
TU7292 other downstream 7300851 34960960 ~ 34963839 (-) False AMCG00004132
TU7224 other downstream 7372077 34891901 ~ 34892613 (-) True G5871
TU8946 other upstream 111749 42376726 ~ 42379406 (-) True AMCG00004313
TU9361 other upstream 2255937 44520914 ~ 44522213 (-) True G7608
TU9683 other upstream 4041949 46306926 ~ 46307319 (-) True G7868
TU9698 other upstream 4203148 46468125 ~ 46468434 (-) True G7882
TU9761 other upstream 4619658 46884635 ~ 46887337 (-) False AMCG00004398

Expression Profile