RNA id: TU9329


Basic Information

Item Value
RNA id TU9329
length 306
lncRNA type inter_gene
GC content 0.45
exon number 1
gene id G7587
representative True

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 44408360 ~ 44408665 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

atacctcggttgtaaTGAGTGGTTATctcagtcaaagttgctcttctatcagcttgaatcagtcggcccattctcctctgacctctagcatcaacaaggcattttcgcccacaagactgccgcatactggatgtttttcccttttcacaccattctttgtaaaccctagaaatggttgtgcgtgaaaatcccagtaactgagcagattgtgaaatactcagaccggcccgtctggcaccaacaaccatgccatgctcaaaattgcttaaatcacctttctttcccattcagacattcagtttggag

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU9327 lncRNA downstream 71790 44336271 ~ 44336570 (-) True G7585
TU9325 lncRNA downstream 230372 44177646 ~ 44177988 (-) True G7583
TU9322 lncRNA downstream 318580 44083097 ~ 44089780 (-) True G7580
TU9289 lncRNA downstream 539654 43868463 ~ 43868706 (-) True G7554
TU9175 lncRNA downstream 979774 43402953 ~ 43428586 (-) True AMCG00004336
TU9363 lncRNA upstream 111510 44520175 ~ 44520818 (-) True G7609
TU9388 lncRNA upstream 140717 44549382 ~ 44550322 (-) False AMCG00004364
TU9451 lncRNA upstream 214525 44623190 ~ 44712051 (-) True AMCG00004372
TU9453 lncRNA upstream 214525 44623190 ~ 44712051 (-) False AMCG00004372
TU9460 lncRNA upstream 224087 44632752 ~ 44633282 (-) True G7684
AMCG00004349 mRNA downstream 297235 44102083 ~ 44111125 (-) True AMCG00004349
AMCG00004350 mRNA downstream 316527 44087376 ~ 44091833 (-) True AMCG00004350
AMCG00004348 mRNA downstream 361122 44015119 ~ 44047238 (-) True AMCG00004348
AMCG00004347 mRNA downstream 405377 43998917 ~ 44002983 (-) True AMCG00004347
AMCG00004345 mRNA downstream 618672 43778149 ~ 43789688 (-) True AMCG00004345
AMCG00004357 mRNA upstream 78743 44487408 ~ 44495762 (-) True AMCG00004357
AMCG00004366 mRNA upstream 92209 44500874 ~ 44508818 (-) True AMCG00004366
AMCG00004356 mRNA upstream 116399 44525064 ~ 44527659 (-) True AMCG00004356
AMCG00004361 mRNA upstream 125899 44534564 ~ 44538108 (-) True AMCG00004361
AMCG00004364 mRNA upstream 131498 44540163 ~ 44561575 (-) True AMCG00004364
TU8946 other downstream 2028954 42376726 ~ 42379406 (-) True AMCG00004313
TU8320 other downstream 4559237 39841935 ~ 39849123 (-) True G6792
TU7893 other downstream 7039538 37367985 ~ 37368822 (-) True G6441
TU7345 other downstream 8993914 35354621 ~ 35414446 (-) False AMCG00004143
TU7292 other downstream 9444521 34960960 ~ 34963839 (-) False AMCG00004132
TU9361 other upstream 112249 44520914 ~ 44522213 (-) True G7608
TU9683 other upstream 1898261 46306926 ~ 46307319 (-) True G7868
TU9698 other upstream 2059460 46468125 ~ 46468434 (-) True G7882
TU9761 other upstream 2475970 46884635 ~ 46887337 (-) False AMCG00004398
TU9801 other upstream 2651231 47059896 ~ 47306589 (-) False AMCG00004403

Expression Profile