RNA id: TU9687


Basic Information

Item Value
RNA id TU9687
length 285
lncRNA type inter_gene
GC content 0.44
exon number 1
gene id G7872
representative True

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 46313722 ~ 46314006 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

GGGCTGTCTGTGGGAACTTGTTGTACTTCTCATGCTTTTCATAGCCATTGAAGTGGAAAATGCACTCTATGAAATGCTGGGAAAACATGACAGGGTTTCTCTTCAGCAGCAGGTGGACCAAACAGAATTCACAAAGCCTGAAACACGGAGCAAGGTGCACTTGTTAAAACTCATGCAAAGGGACCTcctggttaaataaaataataataataaataaataaataaataaatagaggaaACCCTTGAAATTAGGCAGCCTCTACAGCAGGTACCTGGCAATGCTGG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU9686 lncRNA downstream 470 46312957 ~ 46313252 (-) True G7871
TU9685 lncRNA downstream 1038 46312437 ~ 46312684 (-) True G7870
TU9684 lncRNA downstream 4140 46309363 ~ 46309582 (-) True G7869
TU9682 lncRNA downstream 8962 46304514 ~ 46304760 (-) True G7867
TU9681 lncRNA downstream 9351 46304106 ~ 46304371 (-) True G7866
TU9688 lncRNA upstream 673 46314679 ~ 46315186 (-) True G7873
TU9689 lncRNA upstream 1351 46315357 ~ 46315669 (-) True G7874
TU9690 lncRNA upstream 2162 46316168 ~ 46316544 (-) True G7875
TU9691 lncRNA upstream 2596 46316602 ~ 46316845 (-) True G7876
TU9692 lncRNA upstream 4019 46318025 ~ 46318266 (-) True G7877
AMCG00004391 mRNA downstream 13356 46289169 ~ 46300366 (-) True AMCG00004391
AMCG00004393 mRNA downstream 28859 46275576 ~ 46284863 (-) True AMCG00004393
AMCG00004394 mRNA downstream 44304 46254823 ~ 46269418 (-) True AMCG00004394
AMCG00004386 mRNA downstream 228254 46062808 ~ 46085468 (-) True AMCG00004386
AMCG00004385 mRNA downstream 267198 46011535 ~ 46046524 (-) True AMCG00004385
AMCG00004392 mRNA upstream 5292 46319298 ~ 46336014 (-) True AMCG00004392
AMCG00004398 mRNA upstream 569286 46883292 ~ 46887754 (-) True AMCG00004398
AMCG00004402 mRNA upstream 684002 46998008 ~ 47002451 (-) True AMCG00004402
AMCG00004403 mRNA upstream 734118 47048124 ~ 47073819 (-) True AMCG00004403
AMCG00004410 mRNA upstream 2084811 48398817 ~ 48400277 (-) True AMCG00004410
TU9683 other downstream 6403 46306926 ~ 46307319 (-) True G7868
TU9361 other downstream 1791509 44520914 ~ 44522213 (-) True G7608
TU8946 other downstream 3934316 42376726 ~ 42379406 (-) True AMCG00004313
TU8320 other downstream 6464599 39841935 ~ 39849123 (-) True G6792
TU7893 other downstream 8944900 37367985 ~ 37368822 (-) True G6441
TU9698 other upstream 154119 46468125 ~ 46468434 (-) True G7882
TU9761 other upstream 570629 46884635 ~ 46887337 (-) False AMCG00004398
TU9801 other upstream 745890 47059896 ~ 47306589 (-) False AMCG00004403
TU10259 other upstream 3634855 49948861 ~ 49949592 (-) True G8310
TU10293 other upstream 3691126 50005132 ~ 50008694 (-) True G8340

Expression Profile