RNA id: TU9689



Basic Information


Item Value
RNA id TU9689
length 313
lncRNA type inter_gene
GC content 0.50
exon number 1
gene id G7874
representative True

Chromosome Information


Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 46315357 ~ 46315669 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


CTCTCGCACTCGCCAGCTGCCCTCAGGTTGATCACTTATGCAGCAAGAGCGACAGCCATACTGTGGGCTGCTCTCTCAGCCCCAGAGCTGGAGACAATACCGGTTTCAGTCTAGAACCAGAATGGGAACAAAAACGAGTTCTAGGACCTGGAACCAATTAGAATGTTTTCCGGgtgaatttgaaaaaataaatagctctGACCCGCAGGTACGCCATGAGGTCCTTCAGGGCAGGGATGCGCATCTCCTCCAGCATGGCCTTGAGGGATGTGATGATGGGAATCACATTCTCAATAAAATTCTTCTTTTGGAC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU9688 lncRNA downstream 171 46314679 ~ 46315186 (-) True G7873
TU9687 lncRNA downstream 1351 46313722 ~ 46314006 (-) True G7872
TU9686 lncRNA downstream 2105 46312957 ~ 46313252 (-) True G7871
TU9685 lncRNA downstream 2673 46312437 ~ 46312684 (-) True G7870
TU9684 lncRNA downstream 5775 46309363 ~ 46309582 (-) True G7869
TU9690 lncRNA upstream 499 46316168 ~ 46316544 (-) True G7875
TU9691 lncRNA upstream 933 46316602 ~ 46316845 (-) True G7876
TU9692 lncRNA upstream 2356 46318025 ~ 46318266 (-) True G7877
TU9729 lncRNA upstream 401654 46717323 ~ 46718779 (-) True G7910
TU9731 lncRNA upstream 403202 46718871 ~ 46723090 (-) True G7912
AMCG00004391 mRNA downstream 14991 46289169 ~ 46300366 (-) True AMCG00004391
AMCG00004393 mRNA downstream 30494 46275576 ~ 46284863 (-) True AMCG00004393
AMCG00004394 mRNA downstream 45939 46254823 ~ 46269418 (-) True AMCG00004394
AMCG00004386 mRNA downstream 229889 46062808 ~ 46085468 (-) True AMCG00004386
AMCG00004385 mRNA downstream 268833 46011535 ~ 46046524 (-) True AMCG00004385
AMCG00004392 mRNA upstream 3629 46319298 ~ 46336014 (-) True AMCG00004392
AMCG00004398 mRNA upstream 567623 46883292 ~ 46887754 (-) True AMCG00004398
AMCG00004402 mRNA upstream 682339 46998008 ~ 47002451 (-) True AMCG00004402
AMCG00004403 mRNA upstream 732455 47048124 ~ 47073819 (-) True AMCG00004403
AMCG00004410 mRNA upstream 2083148 48398817 ~ 48400277 (-) True AMCG00004410
TU9683 other downstream 8038 46306926 ~ 46307319 (-) True G7868
TU9361 other downstream 1793144 44520914 ~ 44522213 (-) True G7608
TU8946 other downstream 3935951 42376726 ~ 42379406 (-) True AMCG00004313
TU8320 other downstream 6466234 39841935 ~ 39849123 (-) True G6792
TU7893 other downstream 8946535 37367985 ~ 37368822 (-) True G6441
TU9698 other upstream 152456 46468125 ~ 46468434 (-) True G7882
TU9761 other upstream 568966 46884635 ~ 46887337 (-) False AMCG00004398
TU9801 other upstream 744227 47059896 ~ 47306589 (-) False AMCG00004403
TU10259 other upstream 3633192 49948861 ~ 49949592 (-) True G8310
TU10293 other upstream 3689463 50005132 ~ 50008694 (-) True G8340

Expression Profile