RNA id: TU9692


Basic Information

Item Value
RNA id TU9692
length 242
lncRNA type inter_gene
GC content 0.40
exon number 1
gene id G7877
representative True

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 46318025 ~ 46318266 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

CTCGGCCCCAAGGAGATGGGTTACTCACTGCCGGTCCGGGGACATCAAGTACAGGACGTTGGCATCTTTCTTCTCAGAATCTCTGGGCtctgaaaagaaatgcagacGGACATCAGCAGGATCCAGCACTAGTGCCAGCGACGCACGGATGGTTTGACAGCCTGAGACCTACCATTGTCACTGGAGTTTAACAGGGATCTGGAGATGTAACTGACTCCGGCTCCAAACGTCACATTTTCAAT

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU9691 lncRNA downstream 1180 46316602 ~ 46316845 (-) True G7876
TU9690 lncRNA downstream 1481 46316168 ~ 46316544 (-) True G7875
TU9689 lncRNA downstream 2356 46315357 ~ 46315669 (-) True G7874
TU9688 lncRNA downstream 2839 46314679 ~ 46315186 (-) True G7873
TU9687 lncRNA downstream 4019 46313722 ~ 46314006 (-) True G7872
TU9729 lncRNA upstream 399057 46717323 ~ 46718779 (-) True G7910
TU9731 lncRNA upstream 400605 46718871 ~ 46723090 (-) True G7912
TU9766 lncRNA upstream 571381 46889647 ~ 46890133 (-) True G7935
TU9767 lncRNA upstream 572676 46890942 ~ 46893030 (-) True G7936
TU9802 lncRNA upstream 978608 47296874 ~ 47306589 (-) False AMCG00004403
AMCG00004391 mRNA downstream 17659 46289169 ~ 46300366 (-) True AMCG00004391
AMCG00004393 mRNA downstream 33162 46275576 ~ 46284863 (-) True AMCG00004393
AMCG00004394 mRNA downstream 48607 46254823 ~ 46269418 (-) True AMCG00004394
AMCG00004386 mRNA downstream 232557 46062808 ~ 46085468 (-) True AMCG00004386
AMCG00004385 mRNA downstream 271501 46011535 ~ 46046524 (-) True AMCG00004385
AMCG00004392 mRNA upstream 1032 46319298 ~ 46336014 (-) True AMCG00004392
AMCG00004398 mRNA upstream 565026 46883292 ~ 46887754 (-) True AMCG00004398
AMCG00004402 mRNA upstream 679742 46998008 ~ 47002451 (-) True AMCG00004402
AMCG00004403 mRNA upstream 729858 47048124 ~ 47073819 (-) True AMCG00004403
AMCG00004410 mRNA upstream 2080551 48398817 ~ 48400277 (-) True AMCG00004410
TU9683 other downstream 10706 46306926 ~ 46307319 (-) True G7868
TU9361 other downstream 1795812 44520914 ~ 44522213 (-) True G7608
TU8946 other downstream 3938619 42376726 ~ 42379406 (-) True AMCG00004313
TU8320 other downstream 6468902 39841935 ~ 39849123 (-) True G6792
TU7893 other downstream 8949203 37367985 ~ 37368822 (-) True G6441
TU9698 other upstream 149859 46468125 ~ 46468434 (-) True G7882
TU9761 other upstream 566369 46884635 ~ 46887337 (-) False AMCG00004398
TU9801 other upstream 741630 47059896 ~ 47306589 (-) False AMCG00004403
TU10259 other upstream 3630595 49948861 ~ 49949592 (-) True G8310
TU10293 other upstream 3686866 50005132 ~ 50008694 (-) True G8340

Expression Profile