RNA id: TU9766


Basic Information

Item Value
RNA id TU9766
length 487
lncRNA type inter_gene
GC content 0.42
exon number 1
gene id G7935
representative True

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 46889647 ~ 46890133 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

GAATCACCGACGTTATCATACAGCTTGCTGTATCCTCTGACCTCTGCAAAGAACAGGGCTACTGTGGGGATACTGATCCACGGCAGCGAGCTCAGGGCATATTTGATCTCCCGTCTGACCTGGTTCTGTAACATGAATGTATGGTAGACCGTTAAACCCACAAGTCCACAAcccagaaataaaacaacaacggACATATTAAATATCTGTCCTGGAGTAAagcagcttttttttcccccaacctGAAGAAAACTTTGTAAAACGGAGTGAAATCAGAACTCTAGTTGTGACAAAGGAGGAGTTTTATTGCCTGCGTGTAAATTCAAAACAGCAGTTCAAAACAGAATAAGAGGCTCTAAAGAGGTTTAGATTTGTATGATGTCACACTCCAAGGGTATAAAACCACATCCAGCTCCTCTGCCTCCTAATCTTACTATGGCAATTTCAAAgtggcaaaaacaaacaaaacaaaaaaaccagAATTGGG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU9731 lncRNA downstream 166557 46718871 ~ 46723090 (-) True G7912
TU9729 lncRNA downstream 170868 46717323 ~ 46718779 (-) True G7910
TU9692 lncRNA downstream 571381 46318025 ~ 46318266 (-) True G7877
TU9691 lncRNA downstream 572802 46316602 ~ 46316845 (-) True G7876
TU9690 lncRNA downstream 573103 46316168 ~ 46316544 (-) True G7875
TU9767 lncRNA upstream 809 46890942 ~ 46893030 (-) True G7936
TU9802 lncRNA upstream 406741 47296874 ~ 47306589 (-) False AMCG00004403
TU9815 lncRNA upstream 758038 47648171 ~ 47648582 (-) True G7975
TU9818 lncRNA upstream 795498 47685631 ~ 47685874 (-) True G7978
TU9819 lncRNA upstream 795792 47685925 ~ 47686567 (-) True G7979
AMCG00004398 mRNA downstream 1893 46883292 ~ 46887754 (-) True AMCG00004398
AMCG00004392 mRNA downstream 553633 46319298 ~ 46336014 (-) True AMCG00004392
AMCG00004391 mRNA downstream 589281 46289169 ~ 46300366 (-) True AMCG00004391
AMCG00004393 mRNA downstream 604784 46275576 ~ 46284863 (-) True AMCG00004393
AMCG00004394 mRNA downstream 620229 46254823 ~ 46269418 (-) True AMCG00004394
AMCG00004402 mRNA upstream 107875 46998008 ~ 47002451 (-) True AMCG00004402
AMCG00004403 mRNA upstream 157991 47048124 ~ 47073819 (-) True AMCG00004403
AMCG00004410 mRNA upstream 1508684 48398817 ~ 48400277 (-) True AMCG00004410
AMCG00004411 mRNA upstream 1510193 48400326 ~ 48401535 (-) True AMCG00004411
AMCG00004409 mRNA upstream 1514047 48404180 ~ 48425709 (-) True AMCG00004409
TU9761 other downstream 2310 46884635 ~ 46887337 (-) False AMCG00004398
TU9698 other downstream 421213 46468125 ~ 46468434 (-) True G7882
TU9683 other downstream 582328 46306926 ~ 46307319 (-) True G7868
TU9361 other downstream 2367434 44520914 ~ 44522213 (-) True G7608
TU8946 other downstream 4510241 42376726 ~ 42379406 (-) True AMCG00004313
TU9801 other upstream 169763 47059896 ~ 47306589 (-) False AMCG00004403
TU10259 other upstream 3058728 49948861 ~ 49949592 (-) True G8310
TU10293 other upstream 3114999 50005132 ~ 50008694 (-) True G8340
TU10487 other upstream 3780933 50671066 ~ 50673375 (-) True G8501
TU10541 other upstream 3833734 50723867 ~ 50725353 (-) True G8542

Expression Profile