RNA id: AMCG00004745


Basic Information

Item Value
RNA id AMCG00004745
length 386
RNA type mRNA
GC content 0.58
exon number 2
gene id AMCG00004745
representative True

Chromosome Information

Item Value
chromosome id CM030140.1
NCBI id CM030140.1
chromosome length 22460246
location 5996 ~ 8228 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

GCATGGGTTTTGGAGCTCGAACTCGTTCAACTTGCGGCACTGCAGAGTACTTTGCACCAGAAGTCTTGGCACAGAGGCCGTACACCCGGGCAGTGGATTGGTGGACACTAGGTGTTGTCATCTTTGTGATGCTGGTTGGGTGCACACACAGCAGACCACAGTCAAGGAGAGGGCACGCTCTTGCGGCACACAGTTCCACATGCGGCCACCGCACCCTGCCCCCGGATGATGGCCACGCGTCCTGCGCCACCTGCCTGGTGCCAGACCACCTGTGCAGGGCACTGGAGGACCCCTCCTGCGTGATCAGATGCCACTGCTTGGAGCACATCTCCAGACGGCCTTCCTCAGGACATTTTCTTAATGCCAGACTGTGCCAAATAAAGACT

Function

GO:

id name namespace
GO:0016310 phosphorylation biological_process
GO:0000166 nucleotide binding molecular_function
GO:0004672 protein kinase activity molecular_function

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU179547 lncRNA downstream 101086 109314 ~ 110393 (+) True G142737
TU179582 lncRNA downstream 108279 116507 ~ 122522 (+) False AMCG00004749
TU179589 lncRNA downstream 171159 179387 ~ 269208 (+) True G142776
TU179669 lncRNA downstream 427194 435422 ~ 439221 (+) True G142835
TU179699 lncRNA downstream 558155 566383 ~ 570143 (+) True G142847
AMCG00004748 mRNA downstream 12153 20381 ~ 30685 (+) True AMCG00004748
AMCG00004747 mRNA downstream 40627 48855 ~ 109203 (+) True AMCG00004747
AMCG00004749 mRNA downstream 108263 116491 ~ 122965 (+) True AMCG00004749
AMCG00004746 mRNA downstream 126153 134381 ~ 138253 (+) True AMCG00004746
AMCG00004759 mRNA downstream 471618 479846 ~ 507826 (+) True AMCG00004759
TU179968 other downstream 2432313 2440541 ~ 2520689 (+) False G143075
TU179967 other downstream 2540359 2548587 ~ 2559080 (+) True G143075
TU180082 other downstream 3114853 3123081 ~ 3124482 (+) True AMCG00004788
TU180081 other downstream 3114995 3123223 ~ 3124482 (+) False AMCG00004788
TU180140 other downstream 3369587 3377815 ~ 3395158 (+) True AMCG00004793

Expression Profile