RNA id: AMCG00004756


Basic Information

Item Value
RNA id AMCG00004756
length 633
RNA type mRNA
GC content 0.59
exon number 7
gene id AMCG00004756
representative True

Chromosome Information

Item Value
chromosome id CM030140.1
NCBI id CM030140.1
chromosome length 22460246
location 377118 ~ 402042 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGCTCAGGGCCGCTCTCTACCTGCTGGCAGTCAGCCAGGACTTGAGCCCCCACCTGGACCGGGTACCTGTCCTGCACTGCTACTGCACTGCCTGCGCTACGCACTCGTATCTGTTCAGGGGCTCGAAGGACAGAGCCAGGCTGCAGTACAGGGAGTTGAGCGCAGGCTGCAGGGCCTCAGAGTGGGGCGGCTTCAGCCTGACAGCCAGATTTTATGCGGCTTGTGTGGTGCTCGGCTTGCAGTTCCTGCATGAGCACAAAATAGTGTACAGgGATTTAAAGCCTGAAAATTTGGTGCTGGATTCAGAGGGCTATCTGAAAATCACAGACTTTGGTCTGTGCAAGGAAgGATGCACACGCAGCAGACCACAGTCAAGGAAAGGGCACGCTCTTGCGGCACACAGTTCCACATGCGGCCACCGCATCCTGCCCCTGGATGATGGCCACACGTCCTGCGCCACCTGCCTGGTGCCAGACCACCTGTGCAGGGCACTGGAGGACCCCTCCTGCGCTACCCGACGCCACTGCTTGGAGCACATCTGGCTGGAGgacagACTCCCGCGAGCCGACGCGCCTGGTGTTACTGGTTTCCTGTCTCCCAAGCGTTTGTTTAATGGCGGACGGAGGAGTTAA

Function

GO: NA

KEGG:

id description
ko04974 Protein digestion and absorption

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU179656 lncRNA downstream 25491 307116 ~ 351627 (-) True G142828
TU179579 lncRNA downstream 266626 109264 ~ 110492 (-) True G142766
TU179577 lncRNA downstream 267907 105040 ~ 109211 (-) True G142765
TU179753 lncRNA upstream 302248 704290 ~ 705016 (-) True G142890
TU179754 lncRNA upstream 330442 732484 ~ 732959 (-) True G142891
TU179766 lncRNA upstream 378376 780418 ~ 782340 (-) True G142902
TU179784 lncRNA upstream 387060 789102 ~ 792949 (-) True G142920
TU179825 lncRNA upstream 767971 1170013 ~ 1170516 (-) True G142953
AMCG00004752 mRNA downstream 12695 310864 ~ 364423 (-) True AMCG00004752
AMCG00004751 mRNA downstream 71284 266974 ~ 305834 (-) True AMCG00004751
AMCG00004750 mRNA downstream 155941 215361 ~ 221177 (-) True AMCG00004750
AMCG00004755 mRNA upstream 13320 415362 ~ 422526 (-) True AMCG00004755
AMCG00004754 mRNA upstream 23230 425272 ~ 434187 (-) True AMCG00004754
AMCG00004753 mRNA upstream 35932 437974 ~ 445479 (-) True AMCG00004753
AMCG00004761 mRNA upstream 158083 560125 ~ 584445 (-) True AMCG00004761
AMCG00004763 mRNA upstream 242566 644608 ~ 646611 (-) False AMCG00004763
TU179586 other downstream 246415 127778 ~ 130703 (-) True G142773
TU179583 other downstream 254591 119695 ~ 122527 (-) True G142770
TU179730 other upstream 241962 644004 ~ 646379 (-) True AMCG00004763
TU180047 other upstream 2307512 2709554 ~ 2710004 (-) True G143145
TU180095 other upstream 2736815 3138857 ~ 3160673 (-) False AMCG00004790
TU180096 other upstream 2736815 3138857 ~ 3200167 (-) False AMCG00004790
TU180357 other upstream 3711705 4113747 ~ 4116414 (-) False AMCG00004819

Expression Profile