RNA id: AMCG00004765


Basic Information

Item Value
RNA id AMCG00004765
length 1908
RNA type mRNA
GC content 0.63
exon number 2
gene id AMCG00004765
representative True

Chromosome Information

Item Value
chromosome id CM030140.1
NCBI id CM030140.1
chromosome length 22460246
location 793029 ~ 799872 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGCATTCTTTGCTTTCAACAGAGGTCGCAGAAGAGTTGTGTAAAACTGCCACCGCCCTCACCTTCAACCCCCAGCTGCCTATCCTGCCGTCCAAATCTCGCACCCCGAAGAAACACACggagaacaaggagaacatCGAGGGGGGGCTGGAGATGCGACAGGAGTCCCCAGGGCAGAGCGCCCCCTCAGGCCTGTCTGCCAGCCTGCTGGGGGGTGAAGGCCCCGGGGGTTCCCCAGCCCTACCACGCAAGCAGAGGGACAAATCTCCCAGCAGCCTCCTGGAGGACTCGCGGGAGACCACCTTCACACGGGACCGCAAGGCTGGCTTCTTCAGCTCCTTCATGAAGAAGAAGCCGTCCCCACCGCCAAGCCTGCCCACGCCGCCCAAGAGAAGCATCTCCTTCCGGGAGATGGAGAACCAGCCGCACAAGAAGTACGAGCCCAACTCCAACTTCACCAGCTTCAATGCTTCTCTGCCACAGGGGGAGGGACTCAATTTCTCACCCTCGCACGGGGAGGCCAACCACGTGCAGTCACGGTGCTGCGGGGCCAGCTTTGGCCAAAAGACTTCTGCCAACTCCACTGCGGTGGCGGCAGCTGCCCCTCCTGGGGGCAGCGGCTGGGCAGGGCTAGCTGGCTTCTTCACCCCCCGTCTGATCAAGAAGACCTTGGGGCTGAGGACTGGGAAGCCTGCAGGGGTGGAAGAGGTGGCCAGTAACATGGCCAAGCCTTTCCCCAGGTCAAACTCCACTTCTTCCATGTCCTCCGGGCTTCCTGACTTGGAGCGCATGGCACTCACACTGCCGAGGAATGCCCACCGCTCCAAGGCTCAACTGGAAAGGACGTCATCCACCACCTCTCAGCCCGAGGAGGGCGGTGCGAGGTCATCCGAGGTTCTGCTCCGCAAAATGGACGAGGGCACTGCCCAGATCCGGGACAGACCCAAAGCCAAACTGCTGCCccgaggggtggggggtggggctCTGAGGGCACCAGGCGTCGGGGGAGAGTCCGATTCTGATTCTCACTCCCGGGCCAAAGAGGGGGCCCAAGAGACTGGGCAGGACAGGCAAGGCTGGCCGTCCCCTTCTAAGACTGTTGTCTCGAGCCCTGCTGCCGCCCACAATCACAAAGTCCCTGTGCTGATCTCACCCACGCTGAAGCATGCTGCGGCCGACGTGCACCTCATCGGCGTCGACTCTCAGGGGAACCGGTTCAAGCTCCTCTCGGAGCACCAGAGTGACAGAGACCGGCCCAGGCTGGTGAAGCCCAAGTGTGCACCTCCGCCACCACCCACCCTCCGCCTGCTGCCGCACCACTCCACCTCTCTGTACAGTGGCGATGGGGCTGAGGAGCCTGCAGGGGGGTGCGTGCCGGAGGTGAACGGAGAGGGGCTGAAGAAAGCAGGGAAAGCGGCAGGAGGGAGACCATCAGTGCCCCCACCGCAAGTGCCTCCCTCATCGTCGTGCACTTCCTCCTCCTTGAACACCACCCCCACTAAGATGGCGAACGGGGCCACCACCCTTCCAACAGGGTCCGGGGGTGGTGCCAAGGTGGCCCTGCGCAGAGCACGTCAACAGGCTGAGAGGGTGCCGCTGGACAAGATCAGCAAGGAAGCGCTGCTGGAGTGCGCTGAGTCTCTGAGCAACGCCCTGACGGGGGCCACTGAGCCCTCCTCCAGCAGCCAGGTGCTGGACGCCGGACACCAGCTCCTGGACTACTGCTCCGGCTACGTGGACTGCATCCCGCAGATGCGCAATAAGTTCGCCTTCAGGGAGGCGGTGGGCAAACTGGAATTCAGCCTGCAGGAGCTGCGGGCTTCCTCGGGCAGCAGCACAGGGGCCAGCCCCGCCCTGGGCAACCTGCAGACCTGCATCAAGGAGATCAGCGATGTGGTGCAGAGGTAG

Function

GO: NA

KEGG:

id description
K08887 ABL2; abelson tyrosine-protein kinase 2

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU179784 lncRNA downstream 80 789102 ~ 792949 (-) True G142920
TU179766 lncRNA downstream 10689 780418 ~ 782340 (-) True G142902
TU179754 lncRNA downstream 60070 732484 ~ 732959 (-) True G142891
TU179753 lncRNA downstream 88013 704290 ~ 705016 (-) True G142890
TU179656 lncRNA downstream 441402 307116 ~ 351627 (-) True G142828
TU179825 lncRNA upstream 370141 1170013 ~ 1170516 (-) True G142953
TU179831 lncRNA upstream 489792 1289664 ~ 1289985 (-) True G142959
TU179843 lncRNA upstream 580008 1379880 ~ 1380879 (-) True G142967
TU179849 lncRNA upstream 586551 1386423 ~ 1386687 (-) True G142972
TU179873 lncRNA upstream 727706 1527578 ~ 1527810 (-) True G142990
AMCG00004760 mRNA downstream 104578 677866 ~ 688451 (-) True AMCG00004760
AMCG00004762 mRNA downstream 119154 663525 ~ 673875 (-) True AMCG00004762
AMCG00004763 mRNA downstream 146418 644608 ~ 646611 (-) False AMCG00004763
AMCG00004761 mRNA downstream 208584 560125 ~ 584445 (-) True AMCG00004761
AMCG00004753 mRNA downstream 347550 437974 ~ 445479 (-) True AMCG00004753
AMCG00004764 mRNA upstream 34019 833891 ~ 835155 (-) True AMCG00004764
AMCG00004766 mRNA upstream 36370 836242 ~ 858506 (-) True AMCG00004766
AMCG00004767 mRNA upstream 74004 873876 ~ 945686 (-) True AMCG00004767
AMCG00004770 mRNA upstream 200664 1000536 ~ 1001328 (-) True AMCG00004770
AMCG00004769 mRNA upstream 214472 1014344 ~ 1071694 (-) True AMCG00004769
TU179730 other downstream 146650 644004 ~ 646379 (-) True AMCG00004763
TU179586 other downstream 662326 127778 ~ 130703 (-) True G142773
TU179583 other downstream 670502 119695 ~ 122527 (-) True G142770
TU180047 other upstream 1909682 2709554 ~ 2710004 (-) True G143145
TU180095 other upstream 2338985 3138857 ~ 3160673 (-) False AMCG00004790
TU180096 other upstream 2338985 3138857 ~ 3200167 (-) False AMCG00004790
TU180357 other upstream 3313875 4113747 ~ 4116414 (-) False AMCG00004819
TU180667 other upstream 4936937 5736809 ~ 5783184 (-) True G143659

Expression Profile