RNA id: AMCG00004770


Basic Information

Item Value
RNA id AMCG00004770
length 206
RNA type mRNA
GC content 0.52
exon number 2
gene id AMCG00004770
representative True

Chromosome Information

Item Value
chromosome id CM030140.1
NCBI id CM030140.1
chromosome length 22460246
location 1000536 ~ 1001328 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

GTGGGGAGGACAGACAGCAGATGGACTCCGAGCTGCAGAAGGAGATCAGTGTGATCTGGCCTCATCTTTCCCAGAAGATGCTGGATGTCCTGGTGCCCATACACAAGGCCAGCCACATGACAATTGGAAAGATCTACGCCGCCATGATGATCATGGACTACTACAAGACCAGCAAGGctaagaaacagaaacagcagctGGAAGAG

Function

GO: NA

KEGG:

id description
ko04724 Glutamatergic synapse

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU179784 lncRNA downstream 207587 789102 ~ 792949 (-) True G142920
TU179766 lncRNA downstream 218196 780418 ~ 782340 (-) True G142902
TU179754 lncRNA downstream 267577 732484 ~ 732959 (-) True G142891
TU179753 lncRNA downstream 295520 704290 ~ 705016 (-) True G142890
TU179656 lncRNA downstream 648909 307116 ~ 351627 (-) True G142828
TU179825 lncRNA upstream 168685 1170013 ~ 1170516 (-) True G142953
TU179831 lncRNA upstream 288336 1289664 ~ 1289985 (-) True G142959
TU179843 lncRNA upstream 378552 1379880 ~ 1380879 (-) True G142967
TU179849 lncRNA upstream 385095 1386423 ~ 1386687 (-) True G142972
TU179873 lncRNA upstream 526250 1527578 ~ 1527810 (-) True G142990
AMCG00004767 mRNA downstream 54850 873876 ~ 945686 (-) True AMCG00004767
AMCG00004766 mRNA downstream 142030 836242 ~ 858506 (-) True AMCG00004766
AMCG00004764 mRNA downstream 165381 833891 ~ 835155 (-) True AMCG00004764
AMCG00004765 mRNA downstream 200664 793029 ~ 799872 (-) True AMCG00004765
AMCG00004760 mRNA downstream 312085 677866 ~ 688451 (-) True AMCG00004760
AMCG00004769 mRNA upstream 13016 1014344 ~ 1071694 (-) True AMCG00004769
AMCG00004772 mRNA upstream 73122 1074450 ~ 1108517 (-) True AMCG00004772
AMCG00004771 mRNA upstream 141032 1142360 ~ 1150290 (-) True AMCG00004771
AMCG00004768 mRNA upstream 176013 1177341 ~ 1177622 (-) True AMCG00004768
AMCG00004773 mRNA upstream 226797 1228125 ~ 1228583 (-) True AMCG00004773
TU179730 other downstream 354157 644004 ~ 646379 (-) True AMCG00004763
TU179586 other downstream 869833 127778 ~ 130703 (-) True G142773
TU179583 other downstream 878009 119695 ~ 122527 (-) True G142770
TU180047 other upstream 1708226 2709554 ~ 2710004 (-) True G143145
TU180095 other upstream 2137529 3138857 ~ 3160673 (-) False AMCG00004790
TU180096 other upstream 2137529 3138857 ~ 3200167 (-) False AMCG00004790
TU180357 other upstream 3112419 4113747 ~ 4116414 (-) False AMCG00004819
TU180667 other upstream 4735481 5736809 ~ 5783184 (-) True G143659

Expression Profile