Item | Value |
---|---|
RNA id | AMCG00004811 |
length | 501 |
RNA type | mRNA |
GC content | 0.54 |
exon number | 4 |
gene id | AMCG00004811 |
representative | True |
Item | Value |
---|---|
chromosome id | CM030140.1 |
NCBI id | CM030140.1 |
chromosome length | 22460246 |
location | 3908147 ~ 3914961 (-) |
genome version | AmiCal1_2021_bowfin_Genome |
species | bowfin (Amia calva) |
id | name | namespace |
---|---|---|
GO:0017183 | peptidyl-diphthamide biosynthetic process from peptidyl-histidine | biological_process |
GO:0004164 | diphthine synthase activity | molecular_function |
id | description |
---|---|
K00586 | DPH5; diphthine methyl ester synthase |
RNA id | RNA type | direction | distance | location | representative | gene id |
---|---|---|---|---|---|---|
TU180296 | lncRNA | downstream | 5988 | 3898216 ~ 3902159 (-) | True | G143355 |
TU180255 | lncRNA | downstream | 136265 | 3771570 ~ 3771882 (-) | True | G143318 |
TU180247 | lncRNA | downstream | 137804 | 3747928 ~ 3770343 (-) | True | G143311 |
TU180182 | lncRNA | downstream | 316842 | 3589995 ~ 3591305 (-) | True | G143258 |
TU180180 | lncRNA | downstream | 325964 | 3581150 ~ 3582183 (-) | True | G143256 |
TU180315 | lncRNA | upstream | 34454 | 3949415 ~ 3949837 (-) | True | G143370 |
TU180317 | lncRNA | upstream | 57355 | 3972316 ~ 3972545 (-) | True | G143372 |
TU180342 | lncRNA | upstream | 170485 | 4085446 ~ 4088993 (-) | True | G143396 |
TU180346 | lncRNA | upstream | 179689 | 4094650 ~ 4098416 (-) | True | G143400 |
TU180353 | lncRNA | upstream | 192558 | 4107519 ~ 4108856 (-) | True | G143406 |
AMCG00004808 | mRNA | downstream | 44068 | 3856496 ~ 3864079 (-) | True | AMCG00004808 |
AMCG00004801 | mRNA | downstream | 233323 | 3660865 ~ 3674824 (-) | True | AMCG00004801 |
AMCG00004802 | mRNA | downstream | 254142 | 3648760 ~ 3654005 (-) | True | AMCG00004802 |
AMCG00004800 | mRNA | downstream | 259947 | 3641490 ~ 3648200 (-) | True | AMCG00004800 |
AMCG00004799 | mRNA | downstream | 275244 | 3612911 ~ 3632903 (-) | True | AMCG00004799 |
AMCG00004812 | mRNA | upstream | 17165 | 3932126 ~ 3935005 (-) | True | AMCG00004812 |
AMCG00004819 | mRNA | upstream | 194121 | 4109082 ~ 4114193 (-) | True | AMCG00004819 |
AMCG00004820 | mRNA | upstream | 218748 | 4133709 ~ 4150001 (-) | True | AMCG00004820 |
AMCG00004823 | mRNA | upstream | 286047 | 4201008 ~ 4217993 (-) | True | AMCG00004823 |
AMCG00004824 | mRNA | upstream | 410002 | 4324963 ~ 4359936 (-) | True | AMCG00004824 |
TU180096 | other | downstream | 707980 | 3138857 ~ 3200167 (-) | False | AMCG00004790 |
TU180095 | other | downstream | 747474 | 3138857 ~ 3160673 (-) | False | AMCG00004790 |
TU180047 | other | downstream | 1198143 | 2709554 ~ 2710004 (-) | True | G143145 |
TU179730 | other | downstream | 3261768 | 644004 ~ 646379 (-) | True | AMCG00004763 |
TU179586 | other | downstream | 3777444 | 127778 ~ 130703 (-) | True | G142773 |
TU180357 | other | upstream | 198786 | 4113747 ~ 4116414 (-) | False | AMCG00004819 |
TU180667 | other | upstream | 1821848 | 5736809 ~ 5783184 (-) | True | G143659 |
TU181155 | other | upstream | 4439028 | 8353989 ~ 8377001 (-) | True | G144050 |
TU181227 | other | upstream | 4921399 | 8836360 ~ 8840988 (-) | False | AMCG00004894 |
TU181238 | other | upstream | 4957924 | 8872885 ~ 8906594 (-) | True | G144115 |