Gene
RNA
| Item | Value |
|---|---|
| RNA id | AMCG00004892 |
| length | 1300 |
| RNA type | mRNA |
| GC content | 0.49 |
| exon number | 5 |
| gene id | AMCG00004892 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030140.1 |
| NCBI id | CM030140.1 |
| chromosome length | 22460246 |
| location | 8514010 ~ 8528734 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0008270 | zinc ion binding | molecular_function |
| id | description |
|---|---|
| K24099 | LMO4; LIM domain transcription factor LMO4 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU181094 | lncRNA | upstream | 412671 | 8101026 ~ 8101339 (+) | True | G143997 |
| TU181055 | lncRNA | upstream | 464700 | 7978646 ~ 8049310 (+) | True | G143962 |
| TU181065 | lncRNA | upstream | 501992 | 8009531 ~ 8012018 (+) | True | G143970 |
| TU181008 | lncRNA | upstream | 639576 | 7873613 ~ 7874434 (+) | True | G143923 |
| TU180890 | lncRNA | upstream | 821746 | 7672816 ~ 7692264 (+) | False | AMCG00004868 |
| TU181198 | lncRNA | downstream | 264943 | 8793677 ~ 8825780 (+) | True | G144082 |
| TU181233 | lncRNA | downstream | 323511 | 8852245 ~ 8852446 (+) | True | G144111 |
| TU181264 | lncRNA | downstream | 611908 | 9140642 ~ 9141904 (+) | True | G144136 |
| TU181265 | lncRNA | downstream | 616720 | 9145454 ~ 9145853 (+) | True | G144137 |
| TU181268 | lncRNA | downstream | 641261 | 9169995 ~ 9170249 (+) | True | G144139 |
| AMCG00004891 | mRNA | upstream | 45240 | 8459350 ~ 8468770 (+) | True | AMCG00004891 |
| AMCG00004897 | mRNA | upstream | 168120 | 8333771 ~ 8345890 (+) | True | AMCG00004897 |
| AMCG00004896 | mRNA | upstream | 190967 | 8298457 ~ 8323043 (+) | True | AMCG00004896 |
| AMCG00004895 | mRNA | upstream | 219325 | 8289228 ~ 8294685 (+) | True | AMCG00004895 |
| AMCG00004881 | mRNA | upstream | 419549 | 8092811 ~ 8094461 (+) | True | AMCG00004881 |
| AMCG00004906 | mRNA | downstream | 264192 | 8792926 ~ 8822934 (+) | True | AMCG00004906 |
| AMCG00004903 | mRNA | downstream | 325525 | 8854259 ~ 8879736 (+) | True | AMCG00004903 |
| AMCG00004905 | mRNA | downstream | 361235 | 8889969 ~ 8906596 (+) | True | AMCG00004905 |
| AMCG00004904 | mRNA | downstream | 379097 | 8907831 ~ 8917401 (+) | True | AMCG00004904 |
| AMCG00004910 | mRNA | downstream | 620778 | 9149512 ~ 9198176 (+) | True | AMCG00004910 |
| TU180912 | other | upstream | 783010 | 7729389 ~ 7731000 (+) | False | AMCG00004870 |
| TU180621 | other | upstream | 3089889 | 5423703 ~ 5424121 (+) | True | G143626 |
| TU180426 | other | upstream | 4141921 | 4371709 ~ 4372089 (+) | True | G143471 |
| TU180351 | other | upstream | 4404355 | 4109022 ~ 4109655 (+) | True | G143404 |
| TU180311 | other | upstream | 4564173 | 3949426 ~ 3949837 (+) | True | G143366 |
| TU181952 | other | downstream | 3133947 | 11662681 ~ 11663368 (+) | True | G144677 |
| TU182286 | other | downstream | 4251846 | 12780580 ~ 12781170 (+) | True | G144940 |
| TU183002 | other | downstream | 6855509 | 15384243 ~ 15384612 (+) | False | AMCG00005105 |
| TU183561 | other | downstream | 9236523 | 17765257 ~ 17771525 (+) | True | G145932 |
| TU184056 | other | downstream | 11050839 | 19579573 ~ 19579807 (+) | True | G146305 |
