RNA id: AMCG00004921


Basic Information

Item Value
RNA id AMCG00004921
length 234
RNA type mRNA
GC content 0.49
exon number 3
gene id AMCG00004921
representative False

Chromosome Information

Item Value
chromosome id CM030140.1
NCBI id CM030140.1
chromosome length 22460246
location 9700167 ~ 9750777 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGACAGACTTTAAGATGTCTTCGAAGATGCCCAGCTCAAACAACATAGCACAAGCAAGGAGGACAGTGCAGCAGCTAAGGATAGAGGCAAACATCGAGAGGATAAAGGTGTCCAAGGCGTCTGCGGATCTCATGCATTACTGTGGAGAACATGCCAAGTACGACCCCCTACTAATGGGCATCCCAACCTCCGAGAACCCCTTCAAGGACAAAAAGCCCTGCACTATATTGTAG

Function

GO:

id name namespace
GO:0007186 G protein-coupled receptor signaling pathway biological_process
GO:0005834 heterotrimeric G-protein complex cellular_component
GO:0004871 obsolete signal transducer activity molecular_function

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU181382 lncRNA upstream 189065 9554100 ~ 9557475 (+) True G144237
TU181368 lncRNA upstream 245562 9494496 ~ 9500978 (+) True G144227
TU181359 lncRNA upstream 279927 9464141 ~ 9466613 (+) True G144218
TU181351 lncRNA upstream 298007 9447589 ~ 9448533 (+) True G144210
TU181336 lncRNA upstream 302646 9443656 ~ 9443894 (+) True G144195
TU181492 lncRNA downstream 95874 9843429 ~ 9847756 (+) True G144315
TU181493 lncRNA downstream 95874 9843429 ~ 9847756 (+) False G144315
TU181495 lncRNA downstream 95874 9843429 ~ 9847756 (+) False G144315
TU181537 lncRNA downstream 200855 9948410 ~ 10015424 (+) False AMCG00004935
TU181539 lncRNA downstream 254843 10002398 ~ 10015424 (+) True AMCG00004935
AMCG00004929 mRNA upstream 57749 9685517 ~ 9688791 (+) True AMCG00004929
AMCG00004924 mRNA upstream 62417 9663323 ~ 9684123 (+) True AMCG00004924
AMCG00004923 mRNA upstream 88537 9653584 ~ 9658003 (+) True AMCG00004923
AMCG00004928 mRNA upstream 95477 9647466 ~ 9651063 (+) True AMCG00004928
AMCG00004927 mRNA upstream 100128 9632837 ~ 9646412 (+) True AMCG00004927
AMCG00004930 mRNA downstream 15964 9763519 ~ 9779724 (+) True AMCG00004930
AMCG00004932 mRNA downstream 101029 9848584 ~ 9888182 (+) True AMCG00004932
AMCG00004936 mRNA downstream 190866 9938421 ~ 9941239 (+) True AMCG00004936
AMCG00004935 mRNA downstream 250375 9997930 ~ 10011023 (+) False AMCG00004935
AMCG00004934 mRNA downstream 302503 10050058 ~ 10116505 (+) True AMCG00004934
TU180912 other upstream 2015540 7729389 ~ 7731000 (+) False AMCG00004870
TU180621 other upstream 4322419 5423703 ~ 5424121 (+) True G143626
TU180426 other upstream 5374451 4371709 ~ 4372089 (+) True G143471
TU180351 other upstream 5636885 4109022 ~ 4109655 (+) True G143404
TU180311 other upstream 5796703 3949426 ~ 3949837 (+) True G143366
TU181952 other downstream 1915126 11662681 ~ 11663368 (+) True G144677
TU182286 other downstream 3033025 12780580 ~ 12781170 (+) True G144940
TU183002 other downstream 5636688 15384243 ~ 15384612 (+) False AMCG00005105
TU183561 other downstream 8017702 17765257 ~ 17771525 (+) True G145932
TU184056 other downstream 9832018 19579573 ~ 19579807 (+) True G146305

Expression Profile