Gene
RNA
| Item | Value |
|---|---|
| RNA id | AMCG00004928 |
| length | 942 |
| RNA type | mRNA |
| GC content | 0.53 |
| exon number | 6 |
| gene id | AMCG00004928 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030140.1 |
| NCBI id | CM030140.1 |
| chromosome length | 22460246 |
| location | 9647466 ~ 9651063 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0006703 | estrogen biosynthetic process | biological_process |
| GO:0055114 | oxidation-reduction process | biological_process |
| GO:0005737 | cytoplasm | cellular_component |
| GO:0004303 | estradiol 17-beta-dehydrogenase activity | molecular_function |
| id | description |
|---|---|
| K11150 | RDH8; retinol dehydrogenase 8 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU181382 | lncRNA | upstream | 89991 | 9554100 ~ 9557475 (+) | True | G144237 |
| TU181368 | lncRNA | upstream | 146488 | 9494496 ~ 9500978 (+) | True | G144227 |
| TU181359 | lncRNA | upstream | 180853 | 9464141 ~ 9466613 (+) | True | G144218 |
| TU181351 | lncRNA | upstream | 198933 | 9447589 ~ 9448533 (+) | True | G144210 |
| TU181336 | lncRNA | upstream | 203572 | 9443656 ~ 9443894 (+) | True | G144195 |
| TU181455 | lncRNA | downstream | 49104 | 9700167 ~ 9750777 (+) | True | AMCG00004921 |
| TU181492 | lncRNA | downstream | 192366 | 9843429 ~ 9847756 (+) | True | G144315 |
| TU181493 | lncRNA | downstream | 192366 | 9843429 ~ 9847756 (+) | False | G144315 |
| TU181495 | lncRNA | downstream | 192366 | 9843429 ~ 9847756 (+) | False | G144315 |
| TU181537 | lncRNA | downstream | 297347 | 9948410 ~ 10015424 (+) | False | AMCG00004935 |
| AMCG00004927 | mRNA | upstream | 1054 | 9632837 ~ 9646412 (+) | True | AMCG00004927 |
| AMCG00004925 | mRNA | upstream | 28677 | 9594021 ~ 9618789 (+) | True | AMCG00004925 |
| AMCG00004926 | mRNA | upstream | 54272 | 9583401 ~ 9593194 (+) | True | AMCG00004926 |
| AMCG00004918 | mRNA | upstream | 93837 | 9547228 ~ 9553629 (+) | True | AMCG00004918 |
| AMCG00004913 | mRNA | upstream | 228943 | 9411904 ~ 9418523 (+) | True | AMCG00004913 |
| AMCG00004923 | mRNA | downstream | 2521 | 9653584 ~ 9658003 (+) | True | AMCG00004923 |
| AMCG00004924 | mRNA | downstream | 12260 | 9663323 ~ 9684123 (+) | True | AMCG00004924 |
| AMCG00004929 | mRNA | downstream | 34454 | 9685517 ~ 9688791 (+) | True | AMCG00004929 |
| AMCG00004921 | mRNA | downstream | 95477 | 9746540 ~ 9747555 (+) | False | AMCG00004921 |
| AMCG00004930 | mRNA | downstream | 112456 | 9763519 ~ 9779724 (+) | True | AMCG00004930 |
| TU180912 | other | upstream | 1916466 | 7729389 ~ 7731000 (+) | False | AMCG00004870 |
| TU180621 | other | upstream | 4223345 | 5423703 ~ 5424121 (+) | True | G143626 |
| TU180426 | other | upstream | 5275377 | 4371709 ~ 4372089 (+) | True | G143471 |
| TU180351 | other | upstream | 5537811 | 4109022 ~ 4109655 (+) | True | G143404 |
| TU180311 | other | upstream | 5697629 | 3949426 ~ 3949837 (+) | True | G143366 |
| TU181952 | other | downstream | 2011618 | 11662681 ~ 11663368 (+) | True | G144677 |
| TU182286 | other | downstream | 3129517 | 12780580 ~ 12781170 (+) | True | G144940 |
| TU183002 | other | downstream | 5733180 | 15384243 ~ 15384612 (+) | False | AMCG00005105 |
| TU183561 | other | downstream | 8114194 | 17765257 ~ 17771525 (+) | True | G145932 |
| TU184056 | other | downstream | 9928510 | 19579573 ~ 19579807 (+) | True | G146305 |
