Gene
RNA
| Item | Value |
|---|---|
| RNA id | AMCG00004953 |
| length | 1360 |
| RNA type | mRNA |
| GC content | 0.41 |
| exon number | 4 |
| gene id | AMCG00004953 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030140.1 |
| NCBI id | CM030140.1 |
| chromosome length | 22460246 |
| location | 10956236 ~ 10958783 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0006122 | mitochondrial electron transport, ubiquinol to cytochrome c | biological_process |
| GO:0006810 | transport | biological_process |
| GO:0005743 | mitochondrial inner membrane | cellular_component |
| GO:0070469 | respirasome | cellular_component |
| GO:0008121 | ubiquinol-cytochrome-c reductase activity | molecular_function |
| id | description |
|---|---|
| K00416 | QCR6, UQCRH; ubiquinol-cytochrome c reductase subunit 6 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU181537 | lncRNA | upstream | 940812 | 9948410 ~ 10015424 (+) | False | AMCG00004935 |
| TU181539 | lncRNA | upstream | 940812 | 10002398 ~ 10015424 (+) | True | AMCG00004935 |
| TU181492 | lncRNA | upstream | 1108480 | 9843429 ~ 9847756 (+) | True | G144315 |
| TU181740 | lncRNA | downstream | 37599 | 10996382 ~ 10997606 (+) | True | G144512 |
| TU181765 | lncRNA | downstream | 176974 | 11135757 ~ 11139343 (+) | True | G144534 |
| TU181789 | lncRNA | downstream | 239530 | 11198313 ~ 11199835 (+) | True | G144549 |
| TU181831 | lncRNA | downstream | 285819 | 11244602 ~ 11247808 (+) | True | G144581 |
| TU181861 | lncRNA | downstream | 370494 | 11329277 ~ 11331419 (+) | False | G144603 |
| AMCG00004952 | mRNA | upstream | 6152 | 10943249 ~ 10950084 (+) | True | AMCG00004952 |
| AMCG00004951 | mRNA | upstream | 15592 | 10931893 ~ 10940644 (+) | True | AMCG00004951 |
| AMCG00004940 | mRNA | upstream | 75929 | 10877927 ~ 10880307 (+) | True | AMCG00004940 |
| AMCG00004938 | mRNA | upstream | 114782 | 10838986 ~ 10841454 (+) | True | AMCG00004938 |
| AMCG00004939 | mRNA | upstream | 133364 | 10818400 ~ 10822872 (+) | True | AMCG00004939 |
| AMCG00004950 | mRNA | downstream | 41154 | 10999937 ~ 11009196 (+) | True | AMCG00004950 |
| AMCG00004957 | mRNA | downstream | 224474 | 11183257 ~ 11195427 (+) | True | AMCG00004957 |
| AMCG00004958 | mRNA | downstream | 243178 | 11201961 ~ 11214509 (+) | True | AMCG00004958 |
| AMCG00004959 | mRNA | downstream | 258409 | 11217192 ~ 11221581 (+) | True | AMCG00004959 |
| AMCG00004967 | mRNA | downstream | 289357 | 11248140 ~ 11252830 (+) | True | AMCG00004967 |
| TU180912 | other | upstream | 3225236 | 7729389 ~ 7731000 (+) | False | AMCG00004870 |
| TU180621 | other | upstream | 5532115 | 5423703 ~ 5424121 (+) | True | G143626 |
| TU180426 | other | upstream | 6584147 | 4371709 ~ 4372089 (+) | True | G143471 |
| TU180351 | other | upstream | 6846581 | 4109022 ~ 4109655 (+) | True | G143404 |
| TU180311 | other | upstream | 7006399 | 3949426 ~ 3949837 (+) | True | G143366 |
| TU181952 | other | downstream | 703898 | 11662681 ~ 11663368 (+) | True | G144677 |
| TU182286 | other | downstream | 1821797 | 12780580 ~ 12781170 (+) | True | G144940 |
| TU183002 | other | downstream | 4425460 | 15384243 ~ 15384612 (+) | False | AMCG00005105 |
| TU183561 | other | downstream | 6806474 | 17765257 ~ 17771525 (+) | True | G145932 |
| TU184056 | other | downstream | 8620790 | 19579573 ~ 19579807 (+) | True | G146305 |
