Gene
RNA
| Item | Value |
|---|---|
| RNA id | AMCG00004970 |
| length | 1326 |
| RNA type | mRNA |
| GC content | 0.44 |
| exon number | 10 |
| gene id | AMCG00004970 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030140.1 |
| NCBI id | CM030140.1 |
| chromosome length | 22460246 |
| location | 11309960 ~ 11314366 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0055085 | transmembrane transport | biological_process |
| GO:0016021 | integral component of membrane | cellular_component |
| GO:0005509 | calcium ion binding | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU181831 | lncRNA | upstream | 62152 | 11244602 ~ 11247808 (+) | True | G144581 |
| TU181789 | lncRNA | upstream | 110125 | 11198313 ~ 11199835 (+) | True | G144549 |
| TU181765 | lncRNA | upstream | 170617 | 11135757 ~ 11139343 (+) | True | G144534 |
| TU181740 | lncRNA | upstream | 312354 | 10996382 ~ 10997606 (+) | True | G144512 |
| TU181539 | lncRNA | upstream | 1294536 | 10002398 ~ 10015424 (+) | True | AMCG00004935 |
| TU181861 | lncRNA | downstream | 14911 | 11329277 ~ 11331419 (+) | False | G144603 |
| TU181862 | lncRNA | downstream | 14911 | 11329277 ~ 11331419 (+) | True | G144603 |
| TU181933 | lncRNA | downstream | 191316 | 11505682 ~ 11505883 (+) | True | G144658 |
| TU181943 | lncRNA | downstream | 256570 | 11570936 ~ 11577247 (+) | True | G144668 |
| TU181955 | lncRNA | downstream | 355109 | 11669475 ~ 11671442 (+) | True | G144680 |
| AMCG00004967 | mRNA | upstream | 57130 | 11248140 ~ 11252830 (+) | True | AMCG00004967 |
| AMCG00004959 | mRNA | upstream | 88379 | 11217192 ~ 11221581 (+) | True | AMCG00004959 |
| AMCG00004958 | mRNA | upstream | 95451 | 11201961 ~ 11214509 (+) | True | AMCG00004958 |
| AMCG00004957 | mRNA | upstream | 114533 | 11183257 ~ 11195427 (+) | True | AMCG00004957 |
| AMCG00004950 | mRNA | upstream | 300764 | 10999937 ~ 11009196 (+) | True | AMCG00004950 |
| AMCG00004968 | mRNA | downstream | 2335 | 11316701 ~ 11325663 (+) | True | AMCG00004968 |
| AMCG00004969 | mRNA | downstream | 50066 | 11364432 ~ 11389613 (+) | True | AMCG00004969 |
| AMCG00004964 | mRNA | downstream | 87167 | 11401533 ~ 11410342 (+) | True | AMCG00004964 |
| AMCG00004965 | mRNA | downstream | 158164 | 11472530 ~ 11482233 (+) | True | AMCG00004965 |
| AMCG00004966 | mRNA | downstream | 350480 | 11664846 ~ 11666101 (+) | True | AMCG00004966 |
| TU180912 | other | upstream | 3578960 | 7729389 ~ 7731000 (+) | False | AMCG00004870 |
| TU180621 | other | upstream | 5885839 | 5423703 ~ 5424121 (+) | True | G143626 |
| TU180426 | other | upstream | 6937871 | 4371709 ~ 4372089 (+) | True | G143471 |
| TU180351 | other | upstream | 7200305 | 4109022 ~ 4109655 (+) | True | G143404 |
| TU180311 | other | upstream | 7360123 | 3949426 ~ 3949837 (+) | True | G143366 |
| TU181952 | other | downstream | 348315 | 11662681 ~ 11663368 (+) | True | G144677 |
| TU182286 | other | downstream | 1466214 | 12780580 ~ 12781170 (+) | True | G144940 |
| TU183002 | other | downstream | 4069877 | 15384243 ~ 15384612 (+) | False | AMCG00005105 |
| TU183561 | other | downstream | 6450891 | 17765257 ~ 17771525 (+) | True | G145932 |
| TU184056 | other | downstream | 8265207 | 19579573 ~ 19579807 (+) | True | G146305 |
