Gene
RNA
| Item | Value |
|---|---|
| RNA id | AMCG00005038 |
| length | 1572 |
| RNA type | mRNA |
| GC content | 0.51 |
| exon number | 11 |
| gene id | AMCG00005038 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030140.1 |
| NCBI id | CM030140.1 |
| chromosome length | 22460246 |
| location | 13183675 ~ 13218177 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0051716 | cellular response to stimulus | biological_process |
| GO:0006413 | translational initiation | biological_process |
| GO:0043087 | regulation of GTPase activity | biological_process |
| GO:0014003 | oligodendrocyte development | biological_process |
| GO:0005851 | eukaryotic translation initiation factor 2B complex | cellular_component |
| GO:0005085 | guanyl-nucleotide exchange factor activity | molecular_function |
| GO:0016779 | nucleotidyltransferase activity | molecular_function |
| GO:0003743 | translation initiation factor activity | molecular_function |
| id | description |
|---|---|
| K03241 | EIF2B3; translation initiation factor eIF-2B subunit gamma |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU182307 | lncRNA | downstream | 368157 | 12812977 ~ 12815518 (-) | True | G144954 |
| TU182287 | lncRNA | downstream | 402505 | 12780573 ~ 12781170 (-) | True | G144941 |
| TU182259 | lncRNA | downstream | 567725 | 12615715 ~ 12615950 (-) | True | G144920 |
| TU182222 | lncRNA | downstream | 815207 | 12367423 ~ 12368468 (-) | True | G144893 |
| TU182217 | lncRNA | downstream | 835347 | 12346141 ~ 12348328 (-) | True | AMCG00005022 |
| TU182393 | lncRNA | upstream | 39745 | 13257922 ~ 13258861 (-) | True | G145031 |
| TU182539 | lncRNA | upstream | 843544 | 14061721 ~ 14062111 (-) | True | G145129 |
| TU182540 | lncRNA | upstream | 844167 | 14062344 ~ 14062624 (-) | True | G145130 |
| TU182541 | lncRNA | upstream | 844688 | 14062865 ~ 14063123 (-) | True | G145131 |
| TU182553 | lncRNA | upstream | 939403 | 14157580 ~ 14161976 (-) | True | G145138 |
| AMCG00005034 | mRNA | downstream | 13328 | 13139180 ~ 13170347 (-) | True | AMCG00005034 |
| AMCG00005025 | mRNA | downstream | 234720 | 12939515 ~ 12948955 (-) | True | AMCG00005025 |
| AMCG00005027 | mRNA | downstream | 275960 | 12904465 ~ 12907715 (-) | True | AMCG00005027 |
| AMCG00005026 | mRNA | downstream | 341500 | 12818610 ~ 12842175 (-) | True | AMCG00005026 |
| AMCG00005029 | mRNA | downstream | 382008 | 12780271 ~ 12801667 (-) | True | AMCG00005029 |
| AMCG00005040 | mRNA | upstream | 42038 | 13260215 ~ 13262868 (-) | True | AMCG00005040 |
| AMCG00005041 | mRNA | upstream | 45066 | 13263243 ~ 13295419 (-) | True | AMCG00005041 |
| AMCG00005037 | mRNA | upstream | 82946 | 13301123 ~ 13306960 (-) | True | AMCG00005037 |
| AMCG00005039 | mRNA | upstream | 91367 | 13309544 ~ 13313577 (-) | True | AMCG00005039 |
| AMCG00005036 | mRNA | upstream | 97213 | 13315390 ~ 13317852 (-) | True | AMCG00005036 |
| TU182156 | other | downstream | 1027297 | 12154125 ~ 12156378 (-) | False | AMCG00005011 |
| TU182157 | other | downstream | 1027297 | 12154125 ~ 12156378 (-) | True | AMCG00005011 |
| TU181238 | other | downstream | 4277081 | 8872885 ~ 8906594 (-) | True | G144115 |
| TU181227 | other | downstream | 4342687 | 8836360 ~ 8840988 (-) | False | AMCG00004894 |
| TU181155 | other | downstream | 4806674 | 8353989 ~ 8377001 (-) | True | G144050 |
| TU182413 | other | upstream | 118032 | 13336209 ~ 13336746 (-) | True | G145046 |
| TU182803 | other | upstream | 1746402 | 14964579 ~ 14967623 (-) | False | AMCG00005077 |
| TU183873 | other | upstream | 5796370 | 19014547 ~ 19015663 (-) | False | AMCG00005214 |
| TU184064 | other | upstream | 6351882 | 19570059 ~ 19573318 (-) | True | G146313 |
| TU184128 | other | upstream | 6540055 | 19758232 ~ 19761446 (-) | True | AMCG00005240 |
