Gene
RNA
| Item | Value |
|---|---|
| RNA id | AMCG00005051 |
| length | 1086 |
| RNA type | mRNA |
| GC content | 0.56 |
| exon number | 4 |
| gene id | AMCG00005051 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030140.1 |
| NCBI id | CM030140.1 |
| chromosome length | 22460246 |
| location | 14062379 ~ 14063936 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0005694 | chromosome | cellular_component |
| id | description |
|---|---|
| K11504 | CENPL; centromere protein L |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU182456 | lncRNA | upstream | 488919 | 13573242 ~ 13573460 (+) | True | G145067 |
| TU182404 | lncRNA | upstream | 744527 | 13315378 ~ 13317852 (+) | True | G145039 |
| TU182378 | lncRNA | upstream | 803303 | 13257717 ~ 13259076 (+) | True | G145017 |
| TU182366 | lncRNA | upstream | 854162 | 13205340 ~ 13208217 (+) | True | G145007 |
| TU182313 | lncRNA | upstream | 1113406 | 12947182 ~ 12948973 (+) | True | G144960 |
| TU182538 | lncRNA | downstream | 122665 | 14186601 ~ 14188315 (+) | False | AMCG00005060 |
| TU182563 | lncRNA | downstream | 140198 | 14204134 ~ 14204512 (+) | True | G145147 |
| TU182707 | lncRNA | downstream | 612773 | 14676709 ~ 14677597 (+) | True | G145251 |
| TU182730 | lncRNA | downstream | 714302 | 14778238 ~ 14791127 (+) | True | G145268 |
| TU182742 | lncRNA | downstream | 774648 | 14838584 ~ 14861156 (+) | True | G145278 |
| AMCG00005050 | mRNA | upstream | 97957 | 13956702 ~ 13964422 (+) | True | AMCG00005050 |
| AMCG00005052 | mRNA | upstream | 120468 | 13922227 ~ 13941911 (+) | True | AMCG00005052 |
| AMCG00005058 | mRNA | upstream | 414556 | 13644526 ~ 13647823 (+) | True | AMCG00005058 |
| AMCG00005057 | mRNA | upstream | 420683 | 13612606 ~ 13641696 (+) | True | AMCG00005057 |
| AMCG00005043 | mRNA | upstream | 698827 | 13338099 ~ 13363552 (+) | True | AMCG00005043 |
| AMCG00005053 | mRNA | downstream | 17764 | 14081700 ~ 14082904 (+) | True | AMCG00005053 |
| AMCG00005060 | mRNA | downstream | 91219 | 14155155 ~ 14188329 (+) | True | AMCG00005060 |
| AMCG00005059 | mRNA | downstream | 264912 | 14328848 ~ 14370657 (+) | True | AMCG00005059 |
| AMCG00005061 | mRNA | downstream | 314772 | 14378708 ~ 14391257 (+) | True | AMCG00005061 |
| AMCG00005065 | mRNA | downstream | 336245 | 14400181 ~ 14406821 (+) | True | AMCG00005065 |
| TU182286 | other | upstream | 1281209 | 12780580 ~ 12781170 (+) | True | G144940 |
| TU181952 | other | upstream | 2399011 | 11662681 ~ 11663368 (+) | True | G144677 |
| TU180912 | other | upstream | 6331379 | 7729389 ~ 7731000 (+) | False | AMCG00004870 |
| TU180621 | other | upstream | 8638258 | 5423703 ~ 5424121 (+) | True | G143626 |
| TU180426 | other | upstream | 9690290 | 4371709 ~ 4372089 (+) | True | G143471 |
| TU183002 | other | downstream | 1320307 | 15384243 ~ 15384612 (+) | False | AMCG00005105 |
| TU183561 | other | downstream | 3701321 | 17765257 ~ 17771525 (+) | True | G145932 |
| TU184056 | other | downstream | 5515637 | 19579573 ~ 19579807 (+) | True | G146305 |
| TU184341 | other | downstream | 6118418 | 20182354 ~ 20184643 (+) | True | G146519 |
| TU184347 | other | downstream | 6209577 | 20273513 ~ 20279786 (+) | False | AMCG00005272 |
