RNA id: AMCG00005183


Basic Information

Item Value
RNA id AMCG00005183
length 1661
RNA type mRNA
GC content 0.43
exon number 5
gene id AMCG00005183
representative True

Chromosome Information

Item Value
chromosome id CM030140.1
NCBI id CM030140.1
chromosome length 22460246
location 18046691 ~ 18049244 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

CAGAGCAGGTAGCGCTGAGACTGCCTCCAGGCCTGAAACAATACTGCGAGAACATAAagctccacacacacagcatttcGACAATCTGTACAGTCTTTGCAGGGAGCGTTTGGGAAGAGAGGATGCAGACAGCATTATATCTGGTCATGATGCATCAGGCCGCACACAAGGATTTATCTGAGGCGTCGGACATCCTGGTGGAGAATAAGAGAAACAGACAGAAAGACTGGAGATCCAGGTTGAGATATTTTCTGCAAAGACCTTCTACCATGAAGACCTCCTTCTCGAGAAGAAAGTCCTATAGGCCTACAGCTGATGAAGTAAACGAATGGGCCCAGTCCTTGGAAATACTACTTGCCTATAAAtacGGACTGGCTGCGTTCCGGATCTTCCTGAAATCGGAGTTCTGTGAGGAGAATCTCGAGTTCTGGCTCGCCTGCGAGGATTTCAGGAAAATCACATCGCCAGCGAAGACGGCTTCCAGGGCAAAGTGGATTTATGAAGAATTCATCATGAGTGAGGCCCCAAAAGAGATCAACTTGGATTTTTATACGAAAGACGCCATCACTCAGAACCTGCAGCTGCCCACCCCCTCCTGCTTCAGCGCTGCCCAGAAACGAGTCTACTACCTAATGGAGAACAATTCGTACCCACGATTTCTCCAATCTGAGATCTACAAAGAGCTGCGTGCCGTGTCTCTGGGGGAAGGGAAGTATCTGAAGACCTGAACTTTAGCCCGTTGCTTGAAGAAATTTCTATGAAGTGTGTAAAGGGTCAAAGAAAGGACCTTTTCAAAGGTCGTTTTGTTGGAGCGTGGAAGAGTCGATACAGAGTGTAAAGTGCGGAGTGAACATTGTGAAATATGAGctgtttttttacacaaatgTGATGAGGCAACGCTTAGACTTTGACTGTGTGAAAGCACAATTCCCTGCATCAAACAAGTCATAAAAAGGTGAACATCAGGGAGACGTGAAGTGGTTTAAGAATTCAGCTCTTTAAAtgttatgttctttttttatgcaTCTTGTATTGCTCTTGTAAGAGTACAAAGATGACGTTTCATAGGgtaaaaaatgcaaacactaACAGGTCTTGGTGAAAAGGGATTTATGGAGTTACGATGCTGTGAACTAGTTACAACATGTGATGCCTTGCGTCGCTGGACTGCACGGCACCCTTTCCTCTGAGCAGCGGGCTTGTGTGCTGAACCCTGCGCTGCGTCAGAACAGCTGTGATCCAGTGCGTCCTCTCGATCACTGCGGTGTTTACAGCGAATCAGTGACACCACATTCGTCTTCCAAATGTGGATTTATGTTAAGACATCGAGGCTGCAAACAGTGTTTAAAGGGCAAGTGTATGTTGTTAATCATTCTTGTCCCATTTAAATACTAAATTCACTGCCTTAAATGCTTTTGCTCTTGATCCAAGAGTTGGACGATGGATGGACAGATGTGTGTAAATACTTGCTTTCTGCAAATCTCAAGATATTTGAACTTACCCCCCATTTCTGTGGTAATGGTTTATAGATTcctataattacatttaaagataatGCACAGGTCACTTTTCTAAACCTCATGCAACAATTGGTAGCAGGGTCAGgtcattgtatatatataatatctttttttttttttttttttttttgtataatattt

Function

GO: NA

KEGG:

id description
K18154 RGS2; regulator of G-protein signaling 2

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU183641 lncRNA downstream 21017 18024765 ~ 18025674 (-) True G145995
TU183496 lncRNA downstream 500359 17543163 ~ 17546332 (-) True AMCG00005158
TU183346 lncRNA downstream 1081617 16964203 ~ 16965074 (-) True G145760
TU183239 lncRNA downstream 1671274 16374662 ~ 16375417 (-) True G145680
TU183125 lncRNA downstream 2067836 15958851 ~ 15978855 (-) True AMCG00005114
TU183674 lncRNA upstream 248603 18297847 ~ 18298103 (-) True G146022
TU183675 lncRNA upstream 302623 18351867 ~ 18352132 (-) True G146023
TU183766 lncRNA upstream 692640 18741884 ~ 18753533 (-) False AMCG00005207
TU183906 lncRNA upstream 1034751 19083995 ~ 19086041 (-) True G146189
TU183949 lncRNA upstream 1169147 19218391 ~ 19219758 (-) True G146227
AMCG00005184 mRNA downstream 10347 18028243 ~ 18036344 (-) True AMCG00005184
AMCG00005185 mRNA downstream 24460 18011528 ~ 18022231 (-) True AMCG00005185
AMCG00005171 mRNA downstream 63323 17982339 ~ 17983368 (-) True AMCG00005171
AMCG00005170 mRNA downstream 71042 17972354 ~ 17975649 (-) True AMCG00005170
AMCG00005174 mRNA downstream 271265 17761420 ~ 17775426 (-) True AMCG00005174
AMCG00005187 mRNA upstream 14585 18063829 ~ 18066368 (-) True AMCG00005187
AMCG00005186 mRNA upstream 21188 18070432 ~ 18073923 (-) True AMCG00005186
AMCG00005179 mRNA upstream 38161 18087405 ~ 18089115 (-) True AMCG00005179
AMCG00005178 mRNA upstream 54014 18103258 ~ 18109453 (-) True AMCG00005178
AMCG00005193 mRNA upstream 493307 18542551 ~ 18545413 (-) True AMCG00005193
TU182803 other downstream 3079068 14964579 ~ 14967623 (-) False AMCG00005077
TU182413 other downstream 4709945 13336209 ~ 13336746 (-) True G145046
TU182156 other downstream 5890313 12154125 ~ 12156378 (-) False AMCG00005011
TU182157 other downstream 5890313 12154125 ~ 12156378 (-) True AMCG00005011
TU181238 other downstream 9140097 8872885 ~ 8906594 (-) True G144115
TU183873 other upstream 965303 19014547 ~ 19015663 (-) False AMCG00005214
TU184064 other upstream 1520815 19570059 ~ 19573318 (-) True G146313
TU184128 other upstream 1708988 19758232 ~ 19761446 (-) True AMCG00005240
TU184245 other upstream 1971466 20020710 ~ 20023507 (-) False AMCG00005256
TU184246 other upstream 1971466 20020710 ~ 20023507 (-) False AMCG00005256

Expression Profile