Item | Value |
---|---|
RNA id | AMCG00005197 |
length | 975 |
RNA type | mRNA |
GC content | 0.55 |
exon number | 2 |
gene id | AMCG00005197 |
representative | True |
Item | Value |
---|---|
chromosome id | CM030140.1 |
NCBI id | CM030140.1 |
chromosome length | 22460246 |
location | 18824891 ~ 18826492 (+) |
genome version | AmiCal1_2021_bowfin_Genome |
species | bowfin (Amia calva) |
id | name | namespace |
---|---|---|
GO:0002011 | morphogenesis of an epithelial sheet | biological_process |
GO:0055113 | epiboly involved in gastrulation with mouth forming second | biological_process |
GO:0090504 | epiboly | biological_process |
GO:0001702 | gastrulation with mouth forming second | biological_process |
RNA id | RNA type | direction | distance | location | representative | gene id |
---|---|---|---|---|---|---|
TU183799 | lncRNA | upstream | 3249 | 18820357 ~ 18821642 (+) | False | AMCG00005199 |
TU183759 | lncRNA | upstream | 60593 | 18764043 ~ 18764298 (+) | True | G146091 |
TU183758 | lncRNA | upstream | 67020 | 18757667 ~ 18757871 (+) | True | G146090 |
TU183756 | lncRNA | upstream | 68296 | 18756075 ~ 18756595 (+) | True | G146088 |
TU183698 | lncRNA | upstream | 282051 | 18541256 ~ 18542840 (+) | True | G146043 |
TU183835 | lncRNA | downstream | 66575 | 18893067 ~ 18896727 (+) | True | G146140 |
TU183880 | lncRNA | downstream | 222056 | 19048548 ~ 19053126 (+) | True | G146172 |
TU183905 | lncRNA | downstream | 257527 | 19084019 ~ 19084317 (+) | True | G146188 |
TU183921 | lncRNA | downstream | 291039 | 19117531 ~ 19195204 (+) | True | G146202 |
TU183944 | lncRNA | downstream | 391939 | 19218431 ~ 19219345 (+) | True | G146222 |
AMCG00005199 | mRNA | upstream | 3468 | 18815029 ~ 18821423 (+) | True | AMCG00005199 |
AMCG00005198 | mRNA | upstream | 18401 | 18793732 ~ 18806490 (+) | True | AMCG00005198 |
AMCG00005203 | mRNA | upstream | 71301 | 18741992 ~ 18753590 (+) | True | AMCG00005203 |
AMCG00005204 | mRNA | upstream | 90963 | 18728705 ~ 18733928 (+) | True | AMCG00005204 |
AMCG00005205 | mRNA | upstream | 98676 | 18713405 ~ 18726215 (+) | True | AMCG00005205 |
AMCG00005217 | mRNA | downstream | 265735 | 19092227 ~ 19115694 (+) | True | AMCG00005217 |
AMCG00005232 | mRNA | downstream | 648793 | 19475285 ~ 19530453 (+) | True | AMCG00005232 |
AMCG00005231 | mRNA | downstream | 725971 | 19552463 ~ 19564086 (+) | True | AMCG00005231 |
AMCG00005239 | mRNA | downstream | 874971 | 19701463 ~ 19704317 (+) | True | AMCG00005239 |
AMCG00005237 | mRNA | downstream | 882844 | 19709336 ~ 19711528 (+) | True | AMCG00005237 |
TU183561 | other | upstream | 1053366 | 17765257 ~ 17771525 (+) | True | G145932 |
TU183002 | other | upstream | 3440279 | 15384243 ~ 15384612 (+) | False | AMCG00005105 |
TU182286 | other | upstream | 6043721 | 12780580 ~ 12781170 (+) | True | G144940 |
TU181952 | other | upstream | 7161523 | 11662681 ~ 11663368 (+) | True | G144677 |
TU180912 | other | upstream | 11093891 | 7729389 ~ 7731000 (+) | False | AMCG00004870 |
TU184056 | other | downstream | 753081 | 19579573 ~ 19579807 (+) | True | G146305 |
TU184341 | other | downstream | 1355862 | 20182354 ~ 20184643 (+) | True | G146519 |
TU184347 | other | downstream | 1447021 | 20273513 ~ 20279786 (+) | False | AMCG00005272 |
TU184405 | other | downstream | 1695157 | 20521649 ~ 20524819 (+) | True | G146575 |
TU184436 | other | downstream | 1835434 | 20661926 ~ 20670169 (+) | True | G146596 |