Gene
RNA
| Item | Value |
|---|---|
| RNA id | AMCG00005247 |
| length | 1222 |
| RNA type | mRNA |
| GC content | 0.51 |
| exon number | 3 |
| gene id | AMCG00005247 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030140.1 |
| NCBI id | CM030140.1 |
| chromosome length | 22460246 |
| location | 19879542 ~ 19884551 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0006979 | response to oxidative stress | biological_process |
| GO:0055114 | oxidation-reduction process | biological_process |
| GO:0004602 | glutathione peroxidase activity | molecular_function |
| id | description |
|---|---|
| K00432 | gpx, btuE, bsaA; glutathione peroxidase |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU184126 | lncRNA | upstream | 118751 | 19760152 ~ 19760791 (+) | True | G146350 |
| TU184058 | lncRNA | upstream | 286448 | 19592750 ~ 19593094 (+) | True | G146307 |
| TU184057 | lncRNA | upstream | 293886 | 19585448 ~ 19585656 (+) | True | G146306 |
| TU184055 | lncRNA | upstream | 303968 | 19573323 ~ 19575574 (+) | True | G146304 |
| TU184054 | lncRNA | upstream | 309539 | 19569473 ~ 19570003 (+) | True | G146303 |
| TU184234 | lncRNA | downstream | 122865 | 20007416 ~ 20011135 (+) | True | G146442 |
| TU184248 | lncRNA | downstream | 139622 | 20024173 ~ 20026061 (+) | True | G146450 |
| TU184288 | lncRNA | downstream | 223551 | 20108102 ~ 20109541 (+) | True | G146486 |
| TU184340 | lncRNA | downstream | 297803 | 20182354 ~ 20184643 (+) | False | G146519 |
| TU184369 | lncRNA | downstream | 431456 | 20316007 ~ 20333122 (+) | True | G146544 |
| AMCG00005245 | mRNA | upstream | 20928 | 19855589 ~ 19858614 (+) | True | AMCG00005245 |
| AMCG00005248 | mRNA | upstream | 34226 | 19837762 ~ 19845316 (+) | True | AMCG00005248 |
| AMCG00005246 | mRNA | upstream | 43056 | 19816840 ~ 19836486 (+) | True | AMCG00005246 |
| AMCG00005236 | mRNA | upstream | 95938 | 19775479 ~ 19783604 (+) | True | AMCG00005236 |
| AMCG00005235 | mRNA | upstream | 107569 | 19762168 ~ 19771973 (+) | True | AMCG00005235 |
| AMCG00005244 | mRNA | downstream | 50802 | 19935353 ~ 19953666 (+) | True | AMCG00005244 |
| AMCG00005242 | mRNA | downstream | 83128 | 19967679 ~ 19977076 (+) | True | AMCG00005242 |
| AMCG00005254 | mRNA | downstream | 131387 | 20015938 ~ 20019521 (+) | True | AMCG00005254 |
| AMCG00005253 | mRNA | downstream | 162832 | 20047383 ~ 20051117 (+) | True | AMCG00005253 |
| AMCG00005255 | mRNA | downstream | 167398 | 20051949 ~ 20063397 (+) | True | AMCG00005255 |
| TU184056 | other | upstream | 299735 | 19579573 ~ 19579807 (+) | True | G146305 |
| TU183561 | other | upstream | 2108017 | 17765257 ~ 17771525 (+) | True | G145932 |
| TU183002 | other | upstream | 4494930 | 15384243 ~ 15384612 (+) | False | AMCG00005105 |
| TU182286 | other | upstream | 7098372 | 12780580 ~ 12781170 (+) | True | G144940 |
| TU181952 | other | upstream | 8216174 | 11662681 ~ 11663368 (+) | True | G144677 |
| TU184341 | other | downstream | 297803 | 20182354 ~ 20184643 (+) | True | G146519 |
| TU184347 | other | downstream | 388962 | 20273513 ~ 20279786 (+) | False | AMCG00005272 |
| TU184405 | other | downstream | 637098 | 20521649 ~ 20524819 (+) | True | G146575 |
| TU184436 | other | downstream | 777375 | 20661926 ~ 20670169 (+) | True | G146596 |
| TU184446 | other | downstream | 814935 | 20699486 ~ 20702404 (+) | True | AMCG00005286 |
