Gene
RNA
| Item | Value |
|---|---|
| RNA id | AMCG00005310 |
| length | 984 |
| RNA type | mRNA |
| GC content | 0.68 |
| exon number | 1 |
| gene id | AMCG00005310 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030140.1 |
| NCBI id | CM030140.1 |
| chromosome length | 22460246 |
| location | 21338245 ~ 21339228 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0060070 | canonical Wnt signaling pathway | biological_process |
| GO:0006355 | regulation of transcription, DNA-templated | biological_process |
| GO:0046686 | response to cadmium ion | biological_process |
| GO:0051597 | response to methylmercury | biological_process |
| GO:0005634 | nucleus | cellular_component |
| GO:0005667 | transcription regulator complex | cellular_component |
| GO:0043565 | sequence-specific DNA binding | molecular_function |
| GO:0003700 | DNA-binding transcription factor activity | molecular_function |
| GO:0008013 | beta-catenin binding | molecular_function |
| id | description |
|---|---|
| K04448 | JUN; transcription factor AP-1 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU184568 | lncRNA | downstream | 480443 | 20857600 ~ 20857802 (-) | True | G146702 |
| TU184511 | lncRNA | downstream | 580924 | 20756956 ~ 20757321 (-) | True | G146652 |
| TU184485 | lncRNA | downstream | 630639 | 20694815 ~ 20707606 (-) | True | G146631 |
| TU184476 | lncRNA | downstream | 702036 | 20634124 ~ 20636209 (-) | True | G146623 |
| TU184453 | lncRNA | downstream | 737731 | 20600174 ~ 20600514 (-) | True | G146609 |
| TU184704 | lncRNA | upstream | 42078 | 21381306 ~ 21381569 (-) | True | G146813 |
| TU184738 | lncRNA | upstream | 146721 | 21485949 ~ 21487711 (-) | True | AMCG00005333 |
| TU184761 | lncRNA | upstream | 220821 | 21560049 ~ 21561461 (-) | True | G146857 |
| TU184798 | lncRNA | upstream | 250768 | 21589996 ~ 21606535 (-) | True | G146891 |
| TU184859 | lncRNA | upstream | 406316 | 21745544 ~ 21745808 (-) | False | AMCG00005343 |
| AMCG00005306 | mRNA | downstream | 4709 | 21331248 ~ 21333536 (-) | True | AMCG00005306 |
| AMCG00005309 | mRNA | downstream | 8255 | 21327357 ~ 21329990 (-) | True | AMCG00005309 |
| AMCG00005307 | mRNA | downstream | 12150 | 21317619 ~ 21326095 (-) | True | AMCG00005307 |
| AMCG00005308 | mRNA | downstream | 21260 | 21310065 ~ 21316985 (-) | True | AMCG00005308 |
| AMCG00005298 | mRNA | downstream | 223390 | 21111735 ~ 21114855 (-) | True | AMCG00005298 |
| AMCG00005312 | mRNA | upstream | 118180 | 21457408 ~ 21462473 (-) | True | AMCG00005312 |
| AMCG00005333 | mRNA | upstream | 146918 | 21486146 ~ 21486358 (-) | False | AMCG00005333 |
| AMCG00005331 | mRNA | upstream | 164937 | 21504165 ~ 21521031 (-) | True | AMCG00005331 |
| AMCG00005332 | mRNA | upstream | 207207 | 21546435 ~ 21548854 (-) | True | AMCG00005332 |
| AMCG00005334 | mRNA | upstream | 209629 | 21548857 ~ 21551959 (-) | True | AMCG00005334 |
| TU184470 | other | downstream | 727602 | 20609354 ~ 20610643 (-) | True | G146618 |
| TU184357 | other | downstream | 1058499 | 20274391 ~ 20279746 (-) | True | G146532 |
| TU184245 | other | downstream | 1314738 | 20020710 ~ 20023507 (-) | False | AMCG00005256 |
| TU184246 | other | downstream | 1314738 | 20020710 ~ 20023507 (-) | False | AMCG00005256 |
| TU184128 | other | downstream | 1576799 | 19758232 ~ 19761446 (-) | True | AMCG00005240 |
| TU184860 | other | upstream | 405648 | 21744876 ~ 21745453 (-) | True | G146938 |
| TU185079 | other | upstream | 631807 | 21971035 ~ 21982521 (-) | True | AMCG00005363 |
| TU185101 | other | upstream | 691597 | 22030825 ~ 22035272 (-) | False | AMCG00005362 |
| TU185105 | other | upstream | 697367 | 22036595 ~ 22101862 (-) | True | G147109 |
| TU185104 | other | upstream | 744489 | 22083717 ~ 22084944 (-) | True | G147108 |
