RNA id: AMCG00005322



Basic Information


Item Value
RNA id AMCG00005322
length 471
RNA type mRNA
GC content 0.71
exon number 2
gene id AMCG00005322
representative True

Chromosome Information


Item Value
chromosome id CM030140.1
NCBI id CM030140.1
chromosome length 22460246
location 21677587 ~ 21679103 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


ATGGCCGGCCTGATCAATTTCGAGGATGAGAAGGAACGCTCCTGCGAGGCAGGGGGCAGGAAGTCTGCGGAGGCGTGTCACAACGTGGGGCTGCTGGCCCACGACGGCCGCGCGCTGCAGGGAGGAACCGGGGGAGGAGAAGGGGGCGAGGCGGCGCCCATGGCGGACGCCGGGCTGGTGAGGAAGTACTACGAGCGGGCGTGCAGCGGGGGGTTCGCGCCCAGCTGCTTCAACCTGAGCGCCCTGTACATCACGGGTGCCCCCGGCCTGGGCAAGGACATGGCACGGGCCCTCGACTTCGCCCTGCAGGCCTGCCAGCTGGGCCACGTGTGGGGCTGCGCCAACGCCAGCCGCATGTACAAGCTGGGTGAGGGGGCGGCCCGGGATGACGGGCGCGCCGAGGAGCTGAAGAACCGCGCCCGGGAGCTGCACGGCCAGCAGAAGGAGTCCGGGCTCAGCTTCGGGGACTGA

Function


GO: NA

KEGG:

id description
K18180 COA7, SELRC1, RESA1; cytochrome c oxidase assembly factor 7

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU184706 lncRNA upstream 278616 21398676 ~ 21398971 (+) True G146815
TU184664 lncRNA upstream 348685 21326532 ~ 21328902 (+) True G146782
TU184620 lncRNA upstream 612679 21063973 ~ 21064908 (+) True G146749
TU184569 lncRNA upstream 810181 20867206 ~ 20867406 (+) True G146703
TU184567 lncRNA upstream 821669 20855711 ~ 20855918 (+) True G146701
TU184834 lncRNA downstream 31254 21710357 ~ 21712783 (+) True G146915
TU184849 lncRNA downstream 65776 21744879 ~ 21745451 (+) True G146928
TU184983 lncRNA downstream 268983 21948086 ~ 21948618 (+) True G147022
TU184985 lncRNA downstream 271225 21950328 ~ 21950587 (+) True G147024
TU184988 lncRNA downstream 277498 21956601 ~ 21957045 (+) True G147027
AMCG00005317 mRNA upstream 10697 21662349 ~ 21666890 (+) True AMCG00005317
AMCG00005316 mRNA upstream 24799 21641391 ~ 21652788 (+) True AMCG00005316
AMCG00005315 mRNA upstream 42420 21630980 ~ 21635167 (+) True AMCG00005315
AMCG00005314 mRNA upstream 52981 21622078 ~ 21624606 (+) True AMCG00005314
AMCG00005313 mRNA upstream 59406 21606202 ~ 21618181 (+) True AMCG00005313
AMCG00005340 mRNA downstream 24076 21703179 ~ 21704518 (+) False AMCG00005340
AMCG00005339 mRNA downstream 28239 21707342 ~ 21708394 (+) True AMCG00005339
AMCG00005336 mRNA downstream 43477 21722580 ~ 21727870 (+) True AMCG00005336
AMCG00005337 mRNA downstream 54278 21733381 ~ 21737650 (+) True AMCG00005337
AMCG00005338 mRNA downstream 58581 21737684 ~ 21740828 (+) True AMCG00005338
TU184762 other upstream 105266 21570530 ~ 21572321 (+) True AMCG00005329
TU184679 other upstream 336875 21337432 ~ 21340712 (+) True G146790
TU184526 other upstream 874407 20797458 ~ 20803180 (+) False AMCG00005280
TU184446 other upstream 975183 20699486 ~ 20702404 (+) True AMCG00005286
TU184436 other upstream 1007418 20661926 ~ 20670169 (+) True G146596
TU184830 other downstream 1605 21680708 ~ 21704394 (+) True AMCG00005340
TU184875 other downstream 132629 21811732 ~ 21848136 (+) True G146952
TU184903 other downstream 206167 21885270 ~ 21887445 (+) False AMCG00005345
TU184980 other downstream 266455 21945558 ~ 21947991 (+) True G147021
TU184986 other downstream 273466 21952569 ~ 21952882 (+) True G147025

Expression Profile