RNA id: AMCG00005363


Basic Information

Item Value
RNA id AMCG00005363
length 333
RNA type mRNA
GC content 0.61
exon number 2
gene id AMCG00005363
representative False

Chromosome Information

Item Value
chromosome id CM030140.1
NCBI id CM030140.1
chromosome length 22460246
location 21971035 ~ 21982521 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGGCTCGGCGCATTGCGATCATCGGCGGGGGCAGCTCGGGGCTGGCCTGTGTAAAGTGCTGCCTGGACGAGGGGCTGGAGCCGGAGACCCCCGAGTCGGACCGGGCCAGTATCTATCACTCTGTCATCATCAACACCTCCAAGGAGATGATGTGCTTCAGCGACTTCCCGATCCCGGCTCACTTCCCCAACTACATGCACCACTCGCTTATCATGGACTACTTCCGCATGTACGCCGAGCACTTCCAGCTGCTCCCGCACATCCGCTTCCAGGTGAGAGGCCACCAGGGACCCCATCTGCTTCGCACAACACCTCCCAGTGCCCCCGTGTAA

Function

GO:

id name namespace
GO:0005783 endoplasmic reticulum cellular_component
GO:0031090 organelle membrane cellular_component
GO:0004497 monooxygenase activity molecular_function
GO:0050662 obsolete coenzyme binding molecular_function
GO:0000166 nucleotide binding molecular_function

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU184873 lncRNA downstream 164117 21806980 ~ 21807306 (-) True G146951
TU184859 lncRNA downstream 225615 21745544 ~ 21745808 (-) False AMCG00005343
TU184798 lncRNA downstream 364888 21589996 ~ 21606535 (-) True G146891
TU184761 lncRNA downstream 409962 21560049 ~ 21561461 (-) True G146857
TU184738 lncRNA downstream 483712 21485949 ~ 21487711 (-) True AMCG00005333
TU185082 lncRNA upstream 9602 21982058 ~ 21982521 (-) False AMCG00005363
TU185126 lncRNA upstream 159810 22132266 ~ 22180932 (-) True G147122
TU185169 lncRNA upstream 256743 22229199 ~ 22229991 (-) True G147156
TU185197 lncRNA upstream 450533 22422989 ~ 22423230 (-) True G147184
TU185198 lncRNA upstream 453269 22425725 ~ 22426106 (-) True G147185
AMCG00005352 mRNA downstream 10922 21959594 ~ 21960501 (-) True AMCG00005352
AMCG00005353 mRNA downstream 14482 21937448 ~ 21956941 (-) True AMCG00005353
AMCG00005354 mRNA downstream 55124 21911879 ~ 21916299 (-) True AMCG00005354
AMCG00005355 mRNA downstream 61137 21891314 ~ 21910286 (-) True AMCG00005355
AMCG00005346 mRNA downstream 109992 21845044 ~ 21861431 (-) True AMCG00005346
AMCG00005361 mRNA upstream 10345 21982801 ~ 21995515 (-) True AMCG00005361
AMCG00005362 mRNA upstream 60480 22032936 ~ 22054967 (-) True AMCG00005362
AMCG00005360 mRNA upstream 89277 22061733 ~ 22078827 (-) True AMCG00005360
AMCG00005359 mRNA upstream 113838 22086294 ~ 22087753 (-) True AMCG00005359
AMCG00005367 mRNA upstream 131686 22104142 ~ 22112254 (-) True AMCG00005367
TU184860 other downstream 225970 21744876 ~ 21745453 (-) True G146938
TU184470 other downstream 1360780 20609354 ~ 20610643 (-) True G146618
TU184357 other downstream 1691677 20274391 ~ 20279746 (-) True G146532
TU184245 other downstream 1947916 20020710 ~ 20023507 (-) False AMCG00005256
TU185101 other upstream 58369 22030825 ~ 22035272 (-) False AMCG00005362
TU185105 other upstream 64139 22036595 ~ 22101862 (-) True G147109
TU185104 other upstream 111261 22083717 ~ 22084944 (-) True G147108
TU185123 other upstream 155451 22127907 ~ 22130549 (-) True G147121
TU185128 other upstream 173245 22145701 ~ 22158415 (-) True G147124

Expression Profile