RNA id: AMCG00005370


Basic Information

Item Value
RNA id AMCG00005370
length 270
RNA type mRNA
GC content 0.56
exon number 3
gene id AMCG00005370
representative True

Chromosome Information

Item Value
chromosome id CM030140.1
NCBI id CM030140.1
chromosome length 22460246
location 22130285 ~ 22132482 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGTTACCGTCCTGCGGGGCTGTAGCTGAGAAggacagagacggagagatAGGATGTCAAAGGGGAAGTGGTCTTCTCCAGATGTGCCAGAAGAAGAATGATGATGCGTcttttacaacaacaacagcagcaagcTGTCCGGTGAGCTGGACAGAGACCGCAGAGCCCGGTGAGCTGAACAGAACCGCAGAGCCCGGTGAGCTGGACAGAGACCGCAGAGCCCGACTCACGCACACACTGAAGACGGGACACTTGGTGCCGAGACACTAG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU185037 lncRNA upstream 42941 22081644 ~ 22087344 (+) True G147066
TU184988 lncRNA upstream 173240 21956601 ~ 21957045 (+) True G147027
TU184985 lncRNA upstream 179698 21950328 ~ 21950587 (+) True G147024
TU184983 lncRNA upstream 181667 21948086 ~ 21948618 (+) True G147022
TU184849 lncRNA upstream 384834 21744879 ~ 21745451 (+) True G146928
AMCG00005366 mRNA upstream 36 22123782 ~ 22130249 (+) True AMCG00005366
AMCG00005364 mRNA upstream 7314 22116489 ~ 22122971 (+) True AMCG00005364
AMCG00005357 mRNA upstream 68818 22060209 ~ 22061467 (+) True AMCG00005357
AMCG00005358 mRNA upstream 99187 22024523 ~ 22031098 (+) True AMCG00005358
AMCG00005356 mRNA upstream 105797 22020862 ~ 22024488 (+) True AMCG00005356
AMCG00005365 mRNA downstream 83 22132565 ~ 22145610 (+) True AMCG00005365
AMCG00005381 mRNA downstream 43004 22175486 ~ 22178376 (+) True AMCG00005381
AMCG00005378 mRNA downstream 49182 22181664 ~ 22198741 (+) True AMCG00005378
AMCG00005376 mRNA downstream 67703 22200185 ~ 22211145 (+) True AMCG00005376
AMCG00005377 mRNA downstream 92090 22224572 ~ 22229979 (+) True AMCG00005377
TU184992 other upstream 146141 21957440 ~ 21984144 (+) True G147029
TU184996 other upstream 160593 21968302 ~ 21969692 (+) False AMCG00005351
TU184986 other upstream 177403 21952569 ~ 21952882 (+) True G147025
TU184980 other upstream 182294 21945558 ~ 21947991 (+) True G147021
TU184903 other upstream 242840 21885270 ~ 21887445 (+) False AMCG00005345
TU185050 other downstream 6705 22139187 ~ 22144833 (+) False AMCG00005365
TU185051 other downstream 6705 22139187 ~ 22144833 (+) False AMCG00005365

Expression Profile