RNA id: AMCG00005374


Basic Information

Item Value
RNA id AMCG00005374
length 510
RNA type mRNA
GC content 0.66
exon number 3
gene id AMCG00005374
representative True

Chromosome Information

Item Value
chromosome id CM030140.1
NCBI id CM030140.1
chromosome length 22460246
location 22363594 ~ 22368062 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGATTGACGGGTGCACCTTAACCCTTGTGGCCAGTCAGCGCTGGGCTGGAGCCGGGGGCCCTGGCTGGGGGACCGGGCTGGGGACACGGCTCATTGTGCTGTTTGCTCTGAACCAGACGCTGCTGCAGCACGAGGGCGTCCGCGCCGGcagccagcagggcccctacaCCACCGAGGACCTCATCAAGCACTACAACTGCGGGGACCTCGGCAGCGTGATCTTCAACCACGACACCTCGCAGCTCCCGCACTTCATCAACAGCTCCCTGCCGGACCACGAGCGCATCACCGCTCAGCAGATCGACAGCTACTTCCGCCAGGAGCTCATCTACAAGAGGAACGAGCGCATGGGCCGGCGCATCACGGCAATGATGGAGGGCAGCCCGGGGCAGAGCTTCTTCTTCGCCTTCggggcaggtgggcggggcaggtgggcggggcggGACCGGGCGGGGCGGGAGAGCGCTGGGGTACGGCCGTGTGAGCGAACAACATGCCAAGAGTGGTGA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU185169 lncRNA downstream 133603 22229199 ~ 22229991 (-) True G147156
TU185126 lncRNA downstream 182662 22132266 ~ 22180932 (-) True G147122
TU185082 lncRNA downstream 381073 21982058 ~ 21982521 (-) False AMCG00005363
TU184873 lncRNA downstream 556288 21806980 ~ 21807306 (-) True G146951
TU184859 lncRNA downstream 617786 21745544 ~ 21745808 (-) False AMCG00005343
TU185197 lncRNA upstream 54927 22422989 ~ 22423230 (-) True G147184
TU185198 lncRNA upstream 57663 22425725 ~ 22426106 (-) True G147185
AMCG00005382 mRNA downstream 140217 22215959 ~ 22223377 (-) True AMCG00005382
AMCG00005368 mRNA downstream 205189 22147047 ~ 22158405 (-) True AMCG00005368
AMCG00005369 mRNA downstream 217515 22145786 ~ 22146079 (-) True AMCG00005369
AMCG00005367 mRNA downstream 251340 22104142 ~ 22112254 (-) True AMCG00005367
AMCG00005359 mRNA downstream 275841 22086294 ~ 22087753 (-) True AMCG00005359
AMCG00005375 mRNA upstream 26252 22394314 ~ 22395422 (-) True AMCG00005375
AMCG00005373 mRNA upstream 48858 22416920 ~ 22422016 (-) True AMCG00005373
TU185150 other downstream 164826 22195366 ~ 22198768 (-) True G147143
TU185128 other downstream 205179 22145701 ~ 22158415 (-) True G147124
TU185123 other downstream 233045 22127907 ~ 22130549 (-) True G147121
TU185105 other downstream 261732 22036595 ~ 22101862 (-) True G147109

Expression Profile