RNA id: AMCG00005382


Basic Information

Item Value
RNA id AMCG00005382
length 786
RNA type mRNA
GC content 0.66
exon number 2
gene id AMCG00005382
representative True

Chromosome Information

Item Value
chromosome id CM030140.1
NCBI id CM030140.1
chromosome length 22460246
location 22215959 ~ 22223377 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGGGTTGCATCCAGAGCATCACCTGCAAGTCGCGCATCAAGAGGGAGAACATCGTGGTGTACGACGTGTCGGCCACCATCGACCCGAGCCCCACTGTCATCGAGGAGAGCTCGCCCATCGTGCTGCGCTACAAGACCCCCTACTTCAAGGCTTCGGCGCGGGTGGTGATGCCCCCGGTACCCCGCAACGAGACGTGGGTCGTGGGCTGGATCCAAGCCTGCACCCAGATGGAGTTCTACAACACCTACAGCGACATCGGCATGTCGAGCTGGGAGCTGCCGGACCTGCGGGAGGGCCGGGTGAAGGCCATCAGTGACTCCGACGGCGTGAGCTACCCCTGGTACGGTAACACCACGGAGACGGTGACACTGGCCGGCCCCACCAGCAAGGTGTCGCGCTTCAGCGTCAGCATGAACGACAACTTCTACCCCAGCGTGACATGGGCGGTGCCGGTCAGCGACAGCACTCTGCCGCTGCTCACGCGCATCAAACGGGACCAGAGCTTCAGCACCTGGCTGGTGGCGCTCAACACGGCCACCAAGGAGAAGATCCTGCTGCAGACCATCAAGTGGCGCATGCGGGTGGATGTGGAGGTGGACCCCGGGCAGCCGCTGGGGCGCCGGGCCAGGCTGGTGGGCCGGGCGCAGCAGGACCAGCCGCGCATCCTAACGCGCATGGAGCCCATCCCGGCCAACGCGCTGGTCAAGCCCAACGCCAACGACGCGCAGGTGCTCATGTGGAGGCCCAAGCGGGGCCAGCCGGTGGTGGTCATCCCTCCCaagtag

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU185126 lncRNA downstream 35027 22132266 ~ 22180932 (-) True G147122
TU185082 lncRNA downstream 233438 21982058 ~ 21982521 (-) False AMCG00005363
TU184873 lncRNA downstream 408653 21806980 ~ 21807306 (-) True G146951
TU184859 lncRNA downstream 470151 21745544 ~ 21745808 (-) False AMCG00005343
TU184798 lncRNA downstream 609424 21589996 ~ 21606535 (-) True G146891
TU185169 lncRNA upstream 5822 22229199 ~ 22229991 (-) True G147156
TU185197 lncRNA upstream 199612 22422989 ~ 22423230 (-) True G147184
TU185198 lncRNA upstream 202348 22425725 ~ 22426106 (-) True G147185
AMCG00005368 mRNA downstream 57554 22147047 ~ 22158405 (-) True AMCG00005368
AMCG00005369 mRNA downstream 69880 22145786 ~ 22146079 (-) True AMCG00005369
AMCG00005367 mRNA downstream 103705 22104142 ~ 22112254 (-) True AMCG00005367
AMCG00005359 mRNA downstream 128206 22086294 ~ 22087753 (-) True AMCG00005359
AMCG00005360 mRNA downstream 137132 22061733 ~ 22078827 (-) True AMCG00005360
AMCG00005374 mRNA upstream 140217 22363594 ~ 22368062 (-) True AMCG00005374
AMCG00005375 mRNA upstream 170937 22394314 ~ 22395422 (-) True AMCG00005375
AMCG00005373 mRNA upstream 193543 22416920 ~ 22422016 (-) True AMCG00005373
TU185150 other downstream 17191 22195366 ~ 22198768 (-) True G147143
TU185128 other downstream 57544 22145701 ~ 22158415 (-) True G147124
TU185123 other downstream 85410 22127907 ~ 22130549 (-) True G147121
TU185105 other downstream 114097 22036595 ~ 22101862 (-) True G147109
TU185104 other downstream 131015 22083717 ~ 22084944 (-) True G147108

Expression Profile