Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU180353 |
| length | 1338 |
| lncRNA type | inter_gene |
| GC content | 0.39 |
| exon number | 1 |
| gene id | G143406 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030140.1 |
| NCBI id | CM030140.1 |
| chromosome length | 22460246 |
| location | 4107519 ~ 4108856 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0008454 | alpha-1,3-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity | molecular_function |
| GO:0004674 | protein serine/threonine kinase activity | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU180346 | lncRNA | downstream | 9103 | 4094650 ~ 4098416 (-) | True | G143400 |
| TU180342 | lncRNA | downstream | 18526 | 4085446 ~ 4088993 (-) | True | G143396 |
| TU180317 | lncRNA | downstream | 134974 | 3972316 ~ 3972545 (-) | True | G143372 |
| TU180315 | lncRNA | downstream | 157682 | 3949415 ~ 3949837 (-) | True | G143370 |
| TU180296 | lncRNA | downstream | 205360 | 3898216 ~ 3902159 (-) | True | G143355 |
| TU180381 | lncRNA | upstream | 79102 | 4187958 ~ 4191281 (-) | True | G143430 |
| TU180501 | lncRNA | upstream | 682834 | 4791690 ~ 4858146 (-) | True | G143528 |
| TU180512 | lncRNA | upstream | 876532 | 4985388 ~ 4985694 (-) | True | G143539 |
| TU180521 | lncRNA | upstream | 907991 | 5016847 ~ 5017631 (-) | True | G143544 |
| TU180607 | lncRNA | upstream | 1218859 | 5327715 ~ 5402341 (-) | True | G143619 |
| AMCG00004812 | mRNA | downstream | 172514 | 3932126 ~ 3935005 (-) | True | AMCG00004812 |
| AMCG00004811 | mRNA | downstream | 192558 | 3908147 ~ 3914961 (-) | True | AMCG00004811 |
| AMCG00004808 | mRNA | downstream | 243440 | 3856496 ~ 3864079 (-) | True | AMCG00004808 |
| AMCG00004801 | mRNA | downstream | 432695 | 3660865 ~ 3674824 (-) | True | AMCG00004801 |
| AMCG00004802 | mRNA | downstream | 453514 | 3648760 ~ 3654005 (-) | True | AMCG00004802 |
| AMCG00004819 | mRNA | upstream | 226 | 4109082 ~ 4114193 (-) | True | AMCG00004819 |
| AMCG00004820 | mRNA | upstream | 24853 | 4133709 ~ 4150001 (-) | True | AMCG00004820 |
| AMCG00004823 | mRNA | upstream | 92152 | 4201008 ~ 4217993 (-) | True | AMCG00004823 |
| AMCG00004824 | mRNA | upstream | 216107 | 4324963 ~ 4359936 (-) | True | AMCG00004824 |
| AMCG00004829 | mRNA | upstream | 330684 | 4439540 ~ 4482780 (-) | True | AMCG00004829 |
| TU180096 | other | downstream | 907352 | 3138857 ~ 3200167 (-) | False | AMCG00004790 |
| TU180095 | other | downstream | 946846 | 3138857 ~ 3160673 (-) | False | AMCG00004790 |
| TU180047 | other | downstream | 1397515 | 2709554 ~ 2710004 (-) | True | G143145 |
| TU179730 | other | downstream | 3461140 | 644004 ~ 646379 (-) | True | AMCG00004763 |
| TU179586 | other | downstream | 3976816 | 127778 ~ 130703 (-) | True | G142773 |
| TU180357 | other | upstream | 4891 | 4113747 ~ 4116414 (-) | False | AMCG00004819 |
| TU180667 | other | upstream | 1627953 | 5736809 ~ 5783184 (-) | True | G143659 |
| TU181155 | other | upstream | 4245133 | 8353989 ~ 8377001 (-) | True | G144050 |
| TU181227 | other | upstream | 4727504 | 8836360 ~ 8840988 (-) | False | AMCG00004894 |
| TU181238 | other | upstream | 4764029 | 8872885 ~ 8906594 (-) | True | G144115 |
