RNA id: TU182205



Basic Information


Item Value
RNA id TU182205
length 258
lncRNA type inter_gene
GC content 0.58
exon number 1
gene id G144877
representative True

Chromosome Information


Item Value
chromosome id CM030140.1
NCBI id CM030140.1
chromosome length 22460246
location 12302579 ~ 12302836 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


CACTTCTTGTAGGCGTACTCCAGGTAGGATGCCATGAAGCGCATCTCGTACTCTGAGGCATACTTGGTGTCAAAGACCCCCGCTGGAAACATCTCGGAGAGGTCTGCCGTGAAGGTGGACAGGCGTTCGGGCAGGTGTGCGTAGAAGCACTGGTACAAGAAGACCAGGTCAATCAGCCCATTGTGAAGCACCAGCGGCTTCTTGGCCCGCAGCAGCTCCAGGAACAGCGCCCGCATCGTCTGGCCATGCACATCCCCT

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU182139 lncRNA downstream 273130 12023514 ~ 12029449 (-) True G144826
TU182132 lncRNA downstream 292208 12009918 ~ 12010371 (-) True G144821
TU181947 lncRNA downstream 730169 11571190 ~ 11572410 (-) True G144672
TU181934 lncRNA downstream 796577 11505678 ~ 11506002 (-) True G144659
TU181932 lncRNA downstream 801504 11499172 ~ 11501075 (-) True G144657
TU182206 lncRNA upstream 129 12302965 ~ 12303263 (-) True G144878
TU182207 lncRNA upstream 575 12303411 ~ 12303620 (-) True G144879
TU182208 lncRNA upstream 1787 12304623 ~ 12304887 (-) True G144880
TU182217 lncRNA upstream 43305 12346141 ~ 12348328 (-) True AMCG00005022
TU182222 lncRNA upstream 64587 12367423 ~ 12368468 (-) True G144893
AMCG00005020 mRNA downstream 2070 12298967 ~ 12300509 (-) True AMCG00005020
AMCG00005017 mRNA downstream 4797 12289910 ~ 12297782 (-) True AMCG00005017
AMCG00005021 mRNA downstream 14061 12284394 ~ 12288518 (-) True AMCG00005021
AMCG00005004 mRNA downstream 103509 12183940 ~ 12199070 (-) True AMCG00005004
AMCG00005009 mRNA downstream 130349 12163830 ~ 12172230 (-) True AMCG00005009
AMCG00005018 mRNA upstream 7515 12310351 ~ 12315652 (-) True AMCG00005018
AMCG00005019 mRNA upstream 37332 12340168 ~ 12344668 (-) True AMCG00005019
AMCG00005022 mRNA upstream 41835 12344671 ~ 12346490 (-) False AMCG00005022
AMCG00005012 mRNA upstream 141516 12444352 ~ 12454372 (-) True AMCG00005012
AMCG00005029 mRNA upstream 477435 12780271 ~ 12801667 (-) True AMCG00005029
TU182156 other downstream 146201 12154125 ~ 12156378 (-) False AMCG00005011
TU182157 other downstream 146201 12154125 ~ 12156378 (-) True AMCG00005011
TU181238 other downstream 3395985 8872885 ~ 8906594 (-) True G144115
TU181227 other downstream 3461591 8836360 ~ 8840988 (-) False AMCG00004894
TU181155 other downstream 3925578 8353989 ~ 8377001 (-) True G144050
TU182413 other upstream 1033373 13336209 ~ 13336746 (-) True G145046
TU182803 other upstream 2661743 14964579 ~ 14967623 (-) False AMCG00005077
TU183873 other upstream 6711711 19014547 ~ 19015663 (-) False AMCG00005214
TU184064 other upstream 7267223 19570059 ~ 19573318 (-) True G146313
TU184128 other upstream 7455396 19758232 ~ 19761446 (-) True AMCG00005240

Expression Profile