RNA id: TU182208


Basic Information

Item Value
RNA id TU182208
length 265
lncRNA type inter_gene
GC content 0.49
exon number 1
gene id G144880
representative True

Chromosome Information

Item Value
chromosome id CM030140.1
NCBI id CM030140.1
chromosome length 22460246
location 12304623 ~ 12304887 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

NNNtgtagcagaaggcagtttgttcgctgaagggctggagagcggtacacgaatgagcgtcagtgaaacatggtggaggttccttgcaagtttggggctgcatttctgcacatggagttggggatttggtcagaatgaatggtctcctcaatgctgagaagtacagcagatacttatccatcatgtgataccatcagggaggcatctgattggccccacatttattctgcagcatgacaacgaccccaaccatacagtgacagtc

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU182207 lncRNA downstream 1003 12303411 ~ 12303620 (-) True G144879
TU182206 lncRNA downstream 1360 12302965 ~ 12303263 (-) True G144878
TU182205 lncRNA downstream 1787 12302579 ~ 12302836 (-) True G144877
TU182139 lncRNA downstream 275174 12023514 ~ 12029449 (-) True G144826
TU182132 lncRNA downstream 294252 12009918 ~ 12010371 (-) True G144821
TU182217 lncRNA upstream 41254 12346141 ~ 12348328 (-) True AMCG00005022
TU182222 lncRNA upstream 62536 12367423 ~ 12368468 (-) True G144893
TU182259 lncRNA upstream 310828 12615715 ~ 12615950 (-) True G144920
TU182287 lncRNA upstream 475686 12780573 ~ 12781170 (-) True G144941
TU182307 lncRNA upstream 508090 12812977 ~ 12815518 (-) True G144954
AMCG00005020 mRNA downstream 4114 12298967 ~ 12300509 (-) True AMCG00005020
AMCG00005017 mRNA downstream 6841 12289910 ~ 12297782 (-) True AMCG00005017
AMCG00005021 mRNA downstream 16105 12284394 ~ 12288518 (-) True AMCG00005021
AMCG00005004 mRNA downstream 105553 12183940 ~ 12199070 (-) True AMCG00005004
AMCG00005009 mRNA downstream 132393 12163830 ~ 12172230 (-) True AMCG00005009
AMCG00005018 mRNA upstream 5464 12310351 ~ 12315652 (-) True AMCG00005018
AMCG00005019 mRNA upstream 35281 12340168 ~ 12344668 (-) True AMCG00005019
AMCG00005022 mRNA upstream 39784 12344671 ~ 12346490 (-) False AMCG00005022
AMCG00005012 mRNA upstream 139465 12444352 ~ 12454372 (-) True AMCG00005012
AMCG00005029 mRNA upstream 475384 12780271 ~ 12801667 (-) True AMCG00005029
TU182156 other downstream 148245 12154125 ~ 12156378 (-) False AMCG00005011
TU182157 other downstream 148245 12154125 ~ 12156378 (-) True AMCG00005011
TU181238 other downstream 3398029 8872885 ~ 8906594 (-) True G144115
TU181227 other downstream 3463635 8836360 ~ 8840988 (-) False AMCG00004894
TU181155 other downstream 3927622 8353989 ~ 8377001 (-) True G144050
TU182413 other upstream 1031322 13336209 ~ 13336746 (-) True G145046
TU182803 other upstream 2659692 14964579 ~ 14967623 (-) False AMCG00005077
TU183873 other upstream 6709660 19014547 ~ 19015663 (-) False AMCG00005214
TU184064 other upstream 7265172 19570059 ~ 19573318 (-) True G146313
TU184128 other upstream 7453345 19758232 ~ 19761446 (-) True AMCG00005240

Expression Profile