RNA id: TU182541


Basic Information

Item Value
RNA id TU182541
length 259
lncRNA type inter_gene
GC content 0.50
exon number 1
gene id G145131
representative True

Chromosome Information

Item Value
chromosome id CM030140.1
NCBI id CM030140.1
chromosome length 22460246
location 14062865 ~ 14063123 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

TGAATGAAAACTGCTTCCGTATCCTCGTCCGACTCCGTCAGGCCCAAGACCGTGGAGAACGTCACCTTGAAGCCGGTCTCGGGTCCCACTTCCACCGCGGTGCCCTTCTGTTTCTCTGCGGCTATGAAAGCAGACAGCTGCCTGGAGTAGGACTTCAGATGAGTGTGTTTGAATCTATACAGCGGCGTGACATATGAGAGTCTCcattctttctttattaagagAGACAGTTGCTCAGGATTGACTTTCTCctaagaaa

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU182540 lncRNA downstream 241 14062344 ~ 14062624 (-) True G145130
TU182539 lncRNA downstream 754 14061721 ~ 14062111 (-) True G145129
TU182393 lncRNA downstream 804004 13257922 ~ 13258861 (-) True G145031
TU182307 lncRNA downstream 1247347 12812977 ~ 12815518 (-) True G144954
TU182287 lncRNA downstream 1281695 12780573 ~ 12781170 (-) True G144941
TU182553 lncRNA upstream 94457 14157580 ~ 14161976 (-) True G145138
TU182562 lncRNA upstream 116981 14180104 ~ 14183513 (-) True G145146
TU182564 lncRNA upstream 141136 14204259 ~ 14204489 (-) True G145148
TU182594 lncRNA upstream 363843 14426966 ~ 14455083 (-) True G145173
TU182835 lncRNA upstream 1005290 15068413 ~ 15069113 (-) True G145358
AMCG00005055 mRNA downstream 1203 14050704 ~ 14061662 (-) True AMCG00005055
AMCG00005046 mRNA downstream 232519 13804007 ~ 13830346 (-) True AMCG00005046
AMCG00005047 mRNA downstream 318236 13739454 ~ 13744629 (-) True AMCG00005047
AMCG00005049 mRNA downstream 352383 13705226 ~ 13710482 (-) True AMCG00005049
AMCG00005044 mRNA downstream 378156 13672743 ~ 13684709 (-) True AMCG00005044
AMCG00005056 mRNA upstream 3575 14066698 ~ 14075633 (-) True AMCG00005056
AMCG00005054 mRNA upstream 19335 14082458 ~ 14089340 (-) True AMCG00005054
AMCG00005064 mRNA upstream 328113 14391236 ~ 14395883 (-) True AMCG00005064
AMCG00005070 mRNA upstream 417284 14480407 ~ 14483193 (-) True AMCG00005070
AMCG00005069 mRNA upstream 481699 14544822 ~ 14552948 (-) True AMCG00005069
TU182413 other downstream 726119 13336209 ~ 13336746 (-) True G145046
TU182156 other downstream 1906487 12154125 ~ 12156378 (-) False AMCG00005011
TU182157 other downstream 1906487 12154125 ~ 12156378 (-) True AMCG00005011
TU181238 other downstream 5156271 8872885 ~ 8906594 (-) True G144115
TU181227 other downstream 5221877 8836360 ~ 8840988 (-) False AMCG00004894
TU182803 other upstream 901456 14964579 ~ 14967623 (-) False AMCG00005077
TU183873 other upstream 4951424 19014547 ~ 19015663 (-) False AMCG00005214
TU184064 other upstream 5506936 19570059 ~ 19573318 (-) True G146313
TU184128 other upstream 5695109 19758232 ~ 19761446 (-) True AMCG00005240
TU184245 other upstream 5957587 20020710 ~ 20023507 (-) False AMCG00005256

Expression Profile