RNA id: TU182564


Basic Information

Item Value
RNA id TU182564
length 231
lncRNA type inter_gene
GC content 0.45
exon number 1
gene id G145148
representative True

Chromosome Information

Item Value
chromosome id CM030140.1
NCBI id CM030140.1
chromosome length 22460246
location 14204259 ~ 14204489 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

tggggaagcaataaaaaaggcaaacaggatgttagggtatattgtcaaaagtgtagagttgagaacaagggcagtgatgttcagactgtacaatgcactagttagagctcatctggatactgtggacagttctgggctccacacttcaagaaagatattgctgctctagaggcagttcagaggagagcaaccagacttattccaggtctgaagggaatgtcctactgagag

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU182562 lncRNA downstream 20746 14180104 ~ 14183513 (-) True G145146
TU182553 lncRNA downstream 42283 14157580 ~ 14161976 (-) True G145138
TU182541 lncRNA downstream 141136 14062865 ~ 14063123 (-) True G145131
TU182540 lncRNA downstream 141635 14062344 ~ 14062624 (-) True G145130
TU182539 lncRNA downstream 142148 14061721 ~ 14062111 (-) True G145129
TU182594 lncRNA upstream 222477 14426966 ~ 14455083 (-) True G145173
TU182835 lncRNA upstream 863924 15068413 ~ 15069113 (-) True G145358
TU182876 lncRNA upstream 900729 15105218 ~ 15105450 (-) True G145387
TU182894 lncRNA upstream 941309 15145798 ~ 15149592 (-) True G145401
TU182930 lncRNA upstream 1049024 15253513 ~ 15254888 (-) True G145434
AMCG00005054 mRNA downstream 114919 14082458 ~ 14089340 (-) True AMCG00005054
AMCG00005056 mRNA downstream 128626 14066698 ~ 14075633 (-) True AMCG00005056
AMCG00005055 mRNA downstream 142597 14050704 ~ 14061662 (-) True AMCG00005055
AMCG00005046 mRNA downstream 373913 13804007 ~ 13830346 (-) True AMCG00005046
AMCG00005047 mRNA downstream 459630 13739454 ~ 13744629 (-) True AMCG00005047
AMCG00005064 mRNA upstream 186747 14391236 ~ 14395883 (-) True AMCG00005064
AMCG00005070 mRNA upstream 275918 14480407 ~ 14483193 (-) True AMCG00005070
AMCG00005069 mRNA upstream 340333 14544822 ~ 14552948 (-) True AMCG00005069
AMCG00005071 mRNA upstream 378654 14583143 ~ 14618511 (-) True AMCG00005071
AMCG00005073 mRNA upstream 416691 14621180 ~ 14625015 (-) True AMCG00005073
TU182413 other downstream 867513 13336209 ~ 13336746 (-) True G145046
TU182156 other downstream 2047881 12154125 ~ 12156378 (-) False AMCG00005011
TU182157 other downstream 2047881 12154125 ~ 12156378 (-) True AMCG00005011
TU181238 other downstream 5297665 8872885 ~ 8906594 (-) True G144115
TU181227 other downstream 5363271 8836360 ~ 8840988 (-) False AMCG00004894
TU182803 other upstream 760090 14964579 ~ 14967623 (-) False AMCG00005077
TU183873 other upstream 4810058 19014547 ~ 19015663 (-) False AMCG00005214
TU184064 other upstream 5365570 19570059 ~ 19573318 (-) True G146313
TU184128 other upstream 5553743 19758232 ~ 19761446 (-) True AMCG00005240
TU184245 other upstream 5816221 20020710 ~ 20023507 (-) False AMCG00005256

Expression Profile