RNA id: TU182835


Basic Information

Item Value
RNA id TU182835
length 464
lncRNA type inter_gene
GC content 0.60
exon number 3
gene id G145358
representative True

Chromosome Information

Item Value
chromosome id CM030140.1
NCBI id CM030140.1
chromosome length 22460246
location 15068413 ~ 15069113 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

CTTTCGGCCGCTGGTGTCGGCTTCAGTGTGATCTGTCTCTGTTCGGCTGGTCTCTGCTGCTCTTGGGCCTTGCTGGGCGGCTCCTGGGGCTCGTCTCTCTGCTCGTTGTGCCTCTCCTGCTGCTCCCGCAGTTCTCGCAGCTCCCTCTCCTGCCGGCATATGCGGCCCTCGTACTGAGACTTCAGGGCGCTCATGCGCACCTCCTGCTCCTCCCTCTGCTGCTTCAGCTCCTCGATCTCCTTGGTCAGCTGCTCCTTGACACCGATGAGCTGGTTGATTTTCTGTTTGGCCCCCATGAAGGCTTTCTTGGTCTTCTCCTCTTTCTCCGTTATCTGCTGCCGGAGCTGCTCCTCCTGAGAGCAtttctcctgcagctcctgttTGAGGCGGGCCAGCTCGGGCTGCAACTTGTTTACCTGCTCCTGGACACTCTTCACCTCGGCCTCTCGCTCGCTCGCCAACTA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU182594 lncRNA downstream 613330 14426966 ~ 14455083 (-) True G145173
TU182564 lncRNA downstream 863924 14204259 ~ 14204489 (-) True G145148
TU182562 lncRNA downstream 884900 14180104 ~ 14183513 (-) True G145146
TU182553 lncRNA downstream 906437 14157580 ~ 14161976 (-) True G145138
TU182541 lncRNA downstream 1005290 14062865 ~ 14063123 (-) True G145131
TU182876 lncRNA upstream 36105 15105218 ~ 15105450 (-) True G145387
TU182894 lncRNA upstream 76685 15145798 ~ 15149592 (-) True G145401
TU182930 lncRNA upstream 184400 15253513 ~ 15254888 (-) True G145434
TU182932 lncRNA upstream 186776 15255889 ~ 15257664 (-) True G145436
TU182938 lncRNA upstream 192234 15261347 ~ 15266948 (-) True G145441
AMCG00005098 mRNA downstream 11436 15043032 ~ 15056977 (-) True AMCG00005098
AMCG00005099 mRNA downstream 72207 14975251 ~ 14996206 (-) True AMCG00005099
AMCG00005077 mRNA downstream 99171 14964414 ~ 14969242 (-) True AMCG00005077
AMCG00005082 mRNA downstream 215598 14839394 ~ 14852815 (-) True AMCG00005082
AMCG00005083 mRNA downstream 256144 14805917 ~ 14812269 (-) True AMCG00005083
AMCG00005100 mRNA upstream 5559 15074672 ~ 15080833 (-) True AMCG00005100
AMCG00005089 mRNA upstream 24842 15093955 ~ 15101859 (-) True AMCG00005089
AMCG00005087 mRNA upstream 48644 15117757 ~ 15119251 (-) True AMCG00005087
AMCG00005088 mRNA upstream 85315 15154428 ~ 15162185 (-) True AMCG00005088
AMCG00005093 mRNA upstream 96333 15165446 ~ 15182844 (-) True AMCG00005093
TU182803 other downstream 100790 14964579 ~ 14967623 (-) False AMCG00005077
TU182413 other downstream 1731667 13336209 ~ 13336746 (-) True G145046
TU182156 other downstream 2912035 12154125 ~ 12156378 (-) False AMCG00005011
TU182157 other downstream 2912035 12154125 ~ 12156378 (-) True AMCG00005011
TU181238 other downstream 6161819 8872885 ~ 8906594 (-) True G144115
TU183873 other upstream 3945434 19014547 ~ 19015663 (-) False AMCG00005214
TU184064 other upstream 4500946 19570059 ~ 19573318 (-) True G146313
TU184128 other upstream 4689119 19758232 ~ 19761446 (-) True AMCG00005240
TU184245 other upstream 4951597 20020710 ~ 20023507 (-) False AMCG00005256
TU184246 other upstream 4951597 20020710 ~ 20023507 (-) False AMCG00005256

Expression Profile