RNA id: TU182876


Basic Information

Item Value
RNA id TU182876
length 233
lncRNA type inter_gene
GC content 0.53
exon number 1
gene id G145387
representative True

Chromosome Information

Item Value
chromosome id CM030140.1
NCBI id CM030140.1
chromosome length 22460246
location 15105218 ~ 15105450 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

tctgccatttctgcctggatgcacttgcaccacctcaagctcaacctctccaaatcagatctcctctttttcccccactcttcctcaccttctgctgacctccccatctcgatccccttggaatccaccacactctctccttcttcttctgctaaaaatctaggagtcaccctggATCAtgcgctctccttctcccagcacatcaccacgctgacgcggACCTGCAGATTCTT

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU182835 lncRNA downstream 36105 15068413 ~ 15069113 (-) True G145358
TU182594 lncRNA downstream 650135 14426966 ~ 14455083 (-) True G145173
TU182564 lncRNA downstream 900729 14204259 ~ 14204489 (-) True G145148
TU182562 lncRNA downstream 921705 14180104 ~ 14183513 (-) True G145146
TU182553 lncRNA downstream 943242 14157580 ~ 14161976 (-) True G145138
TU182894 lncRNA upstream 40348 15145798 ~ 15149592 (-) True G145401
TU182930 lncRNA upstream 148063 15253513 ~ 15254888 (-) True G145434
TU182932 lncRNA upstream 150439 15255889 ~ 15257664 (-) True G145436
TU182938 lncRNA upstream 155897 15261347 ~ 15266948 (-) True G145441
TU183041 lncRNA upstream 397821 15503271 ~ 15520163 (-) False AMCG00005111
AMCG00005089 mRNA downstream 3359 15093955 ~ 15101859 (-) True AMCG00005089
AMCG00005100 mRNA downstream 24385 15074672 ~ 15080833 (-) True AMCG00005100
AMCG00005098 mRNA downstream 48241 15043032 ~ 15056977 (-) True AMCG00005098
AMCG00005099 mRNA downstream 109012 14975251 ~ 14996206 (-) True AMCG00005099
AMCG00005077 mRNA downstream 135976 14964414 ~ 14969242 (-) True AMCG00005077
AMCG00005087 mRNA upstream 12307 15117757 ~ 15119251 (-) True AMCG00005087
AMCG00005088 mRNA upstream 48978 15154428 ~ 15162185 (-) True AMCG00005088
AMCG00005093 mRNA upstream 59996 15165446 ~ 15182844 (-) True AMCG00005093
AMCG00005092 mRNA upstream 137111 15242561 ~ 15249295 (-) True AMCG00005092
AMCG00005108 mRNA upstream 180253 15285703 ~ 15304821 (-) True AMCG00005108
TU182803 other downstream 137595 14964579 ~ 14967623 (-) False AMCG00005077
TU182413 other downstream 1768472 13336209 ~ 13336746 (-) True G145046
TU182156 other downstream 2948840 12154125 ~ 12156378 (-) False AMCG00005011
TU182157 other downstream 2948840 12154125 ~ 12156378 (-) True AMCG00005011
TU181238 other downstream 6198624 8872885 ~ 8906594 (-) True G144115
TU183873 other upstream 3909097 19014547 ~ 19015663 (-) False AMCG00005214
TU184064 other upstream 4464609 19570059 ~ 19573318 (-) True G146313
TU184128 other upstream 4652782 19758232 ~ 19761446 (-) True AMCG00005240
TU184245 other upstream 4915260 20020710 ~ 20023507 (-) False AMCG00005256
TU184246 other upstream 4915260 20020710 ~ 20023507 (-) False AMCG00005256

Expression Profile