RNA id: TU183758



Basic Information


Item Value
RNA id TU183758
length 205
lncRNA type inter_gene
GC content 0.56
exon number 1
gene id G146090
representative True

Chromosome Information


Item Value
chromosome id CM030140.1
NCBI id CM030140.1
chromosome length 22460246
location 18757667 ~ 18757871 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


CCTGTTAACGGTAGGCTGAAGGTGGTGGGCGGAGACTTCCCTCTGGAGTTGCGTGCCGACAGGGTGACGGTGCACCGGGAGCAAAAGATGGGCCTGCTGCGGCTGCTGTTGGCAGGGTACTCTTCCTGCTTCTTCTCTGCTTGATCCTCAATGACCATATCATAGTGTAAGACTGTCCCCCTGGCTTCAGACTCTGATAGTTTCT

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU183756 lncRNA upstream 1072 18756075 ~ 18756595 (+) True G146088
TU183698 lncRNA upstream 214827 18541256 ~ 18542840 (+) True G146043
TU183673 lncRNA upstream 459564 18297874 ~ 18298103 (+) True G146021
TU183614 lncRNA upstream 685892 18020892 ~ 18071775 (+) True G145975
TU183597 lncRNA upstream 898032 17859136 ~ 17859635 (+) True G145960
TU183759 lncRNA downstream 6172 18764043 ~ 18764298 (+) True G146091
TU183799 lncRNA downstream 62486 18820357 ~ 18821642 (+) False AMCG00005199
TU183835 lncRNA downstream 135196 18893067 ~ 18896727 (+) True G146140
TU183880 lncRNA downstream 290677 19048548 ~ 19053126 (+) True G146172
TU183905 lncRNA downstream 326148 19084019 ~ 19084317 (+) True G146188
AMCG00005203 mRNA upstream 4077 18741992 ~ 18753590 (+) True AMCG00005203
AMCG00005204 mRNA upstream 23739 18728705 ~ 18733928 (+) True AMCG00005204
AMCG00005205 mRNA upstream 31452 18713405 ~ 18726215 (+) True AMCG00005205
AMCG00005206 mRNA upstream 61961 18684208 ~ 18695706 (+) True AMCG00005206
AMCG00005195 mRNA upstream 93402 18645445 ~ 18664265 (+) True AMCG00005195
AMCG00005198 mRNA downstream 35861 18793732 ~ 18806490 (+) True AMCG00005198
AMCG00005199 mRNA downstream 57158 18815029 ~ 18821423 (+) True AMCG00005199
AMCG00005197 mRNA downstream 67020 18824891 ~ 18826492 (+) True AMCG00005197
AMCG00005217 mRNA downstream 334356 19092227 ~ 19115694 (+) True AMCG00005217
AMCG00005232 mRNA downstream 717414 19475285 ~ 19530453 (+) True AMCG00005232
TU183561 other upstream 986142 17765257 ~ 17771525 (+) True G145932
TU183002 other upstream 3373055 15384243 ~ 15384612 (+) False AMCG00005105
TU182286 other upstream 5976497 12780580 ~ 12781170 (+) True G144940
TU181952 other upstream 7094299 11662681 ~ 11663368 (+) True G144677
TU180912 other upstream 11026667 7729389 ~ 7731000 (+) False AMCG00004870
TU184056 other downstream 821702 19579573 ~ 19579807 (+) True G146305
TU184341 other downstream 1424483 20182354 ~ 20184643 (+) True G146519
TU184347 other downstream 1515642 20273513 ~ 20279786 (+) False AMCG00005272
TU184405 other downstream 1763778 20521649 ~ 20524819 (+) True G146575
TU184436 other downstream 1904055 20661926 ~ 20670169 (+) True G146596

Expression Profile