RNA id: TU184126


Basic Information

Item Value
RNA id TU184126
length 263
lncRNA type inter_gene
GC content 0.57
exon number 2
gene id G146350
representative True

Chromosome Information

Item Value
chromosome id CM030140.1
NCBI id CM030140.1
chromosome length 22460246
location 19760152 ~ 19760791 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

AAGAACATCTCTCTCTGGAAGTCGTCCTCGGTGCTGAGCTCTTTGCTCTCCTGTGCCACCGTCTTCCCCTCCGCTTTGGCCGCCATGTCCGGAGCCGGCAAGTTCGTCAGGTCCAGCCTCTCCACCCAGGGCAGGTCCTTTTTGAAGTCTTCTAAACACATCTTCATGGCCTCCTGGAGACTCACGTTGTTGACGGTCGTCTTGGGCTCCAGAGGGATGTTCATGCCAGGTTTCAGCAGCCCTTTGCTGAACGCTTCTTGGAG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU184058 lncRNA upstream 167058 19592750 ~ 19593094 (+) True G146307
TU184057 lncRNA upstream 174496 19585448 ~ 19585656 (+) True G146306
TU184055 lncRNA upstream 184578 19573323 ~ 19575574 (+) True G146304
TU184054 lncRNA upstream 190149 19569473 ~ 19570003 (+) True G146303
TU183999 lncRNA upstream 279554 19475139 ~ 19480598 (+) False AMCG00005232
TU184234 lncRNA downstream 246625 20007416 ~ 20011135 (+) True G146442
TU184248 lncRNA downstream 263382 20024173 ~ 20026061 (+) True G146450
TU184288 lncRNA downstream 347311 20108102 ~ 20109541 (+) True G146486
TU184340 lncRNA downstream 421563 20182354 ~ 20184643 (+) False G146519
TU184369 lncRNA downstream 555216 20316007 ~ 20333122 (+) True G146544
AMCG00005238 mRNA upstream 4362 19742353 ~ 19755790 (+) True AMCG00005238
AMCG00005237 mRNA upstream 48624 19709336 ~ 19711528 (+) True AMCG00005237
AMCG00005239 mRNA upstream 55835 19701463 ~ 19704317 (+) True AMCG00005239
AMCG00005231 mRNA upstream 196066 19552463 ~ 19564086 (+) True AMCG00005231
AMCG00005232 mRNA upstream 229699 19475285 ~ 19530453 (+) True AMCG00005232
AMCG00005235 mRNA downstream 1377 19762168 ~ 19771973 (+) True AMCG00005235
AMCG00005236 mRNA downstream 14688 19775479 ~ 19783604 (+) True AMCG00005236
AMCG00005246 mRNA downstream 56049 19816840 ~ 19836486 (+) True AMCG00005246
AMCG00005248 mRNA downstream 76971 19837762 ~ 19845316 (+) True AMCG00005248
AMCG00005245 mRNA downstream 94798 19855589 ~ 19858614 (+) True AMCG00005245
TU184056 other upstream 180345 19579573 ~ 19579807 (+) True G146305
TU183561 other upstream 1988627 17765257 ~ 17771525 (+) True G145932
TU183002 other upstream 4375540 15384243 ~ 15384612 (+) False AMCG00005105
TU182286 other upstream 6978982 12780580 ~ 12781170 (+) True G144940
TU181952 other upstream 8096784 11662681 ~ 11663368 (+) True G144677
TU184341 other downstream 421563 20182354 ~ 20184643 (+) True G146519
TU184347 other downstream 512722 20273513 ~ 20279786 (+) False AMCG00005272
TU184405 other downstream 760858 20521649 ~ 20524819 (+) True G146575
TU184436 other downstream 901135 20661926 ~ 20670169 (+) True G146596
TU184446 other downstream 938695 20699486 ~ 20702404 (+) True AMCG00005286

Expression Profile