RNA id: TU184422


Basic Information

Item Value
RNA id TU184422
length 223
lncRNA type inter_gene
GC content 0.44
exon number 3
gene id G146590
representative True

Chromosome Information

Item Value
chromosome id CM030140.1
NCBI id CM030140.1
chromosome length 22460246
location 20642268 ~ 20655773 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

TGCAAATGAAGCCGCTTGCTGAAACATATGGAGAGATTTTTAGCCTTCGAATTGGAAAGAGACTCATCGTCCTGAATGGTTACAAGCTGGTCAAGGAGGCTTTGGTCCAACATGGAGATGATTATGTGGATCGGCCATCGCTGCCAATTTCTGAAGACATGTACCCAAGGAAAGATCCTGGCTTGGTAATGTCCAATGGGTACTCATGGAAGCAANNNNNNNN

Function

GO:

id name namespace
GO:0004055 argininosuccinate synthase activity molecular_function

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU184369 lncRNA upstream 309146 20316007 ~ 20333122 (+) True G146544
TU184340 lncRNA upstream 457625 20182354 ~ 20184643 (+) False G146519
TU184288 lncRNA upstream 532727 20108102 ~ 20109541 (+) True G146486
TU184248 lncRNA upstream 616207 20024173 ~ 20026061 (+) True G146450
TU184234 lncRNA upstream 631133 20007416 ~ 20011135 (+) True G146442
TU184435 lncRNA downstream 10310 20666083 ~ 20670169 (+) False G146596
TU184442 lncRNA downstream 26852 20682625 ~ 20683984 (+) True G146599
TU184443 lncRNA downstream 26852 20682625 ~ 20738321 (+) False G146599
TU184498 lncRNA downstream 94531 20750304 ~ 20750938 (+) True G146640
TU184567 lncRNA downstream 199938 20855711 ~ 20855918 (+) True G146701
AMCG00005279 mRNA upstream 14337 20597743 ~ 20627931 (+) True AMCG00005279
AMCG00005278 mRNA upstream 46514 20589746 ~ 20595754 (+) True AMCG00005278
AMCG00005274 mRNA upstream 152604 20484932 ~ 20489664 (+) True AMCG00005274
AMCG00005272 mRNA upstream 362691 20253009 ~ 20279577 (+) True AMCG00005272
AMCG00005273 mRNA upstream 432811 20208791 ~ 20209457 (+) True AMCG00005273
AMCG00005286 mRNA downstream 43984 20699757 ~ 20702472 (+) False AMCG00005286
AMCG00005287 mRNA downstream 85405 20741178 ~ 20742301 (+) True AMCG00005287
AMCG00005288 mRNA downstream 107859 20763632 ~ 20768980 (+) True AMCG00005288
AMCG00005282 mRNA downstream 125535 20781308 ~ 20794020 (+) True AMCG00005282
AMCG00005280 mRNA downstream 141795 20797568 ~ 20803197 (+) True AMCG00005280
TU184405 other upstream 117449 20521649 ~ 20524819 (+) True G146575
TU184347 other upstream 362482 20273513 ~ 20279786 (+) False AMCG00005272
TU184341 other upstream 457625 20182354 ~ 20184643 (+) True G146519
TU184056 other upstream 1062461 19579573 ~ 19579807 (+) True G146305
TU183561 other upstream 2870743 17765257 ~ 17771525 (+) True G145932
TU184436 other downstream 6153 20661926 ~ 20670169 (+) True G146596
TU184446 other downstream 43713 20699486 ~ 20702404 (+) True AMCG00005286
TU184526 other downstream 141685 20797458 ~ 20803180 (+) False AMCG00005280
TU184679 other downstream 681659 21337432 ~ 21340712 (+) True G146790
TU184762 other downstream 914757 21570530 ~ 21572321 (+) True AMCG00005329

Expression Profile