RNA id: TU184451


Basic Information

Item Value
RNA id TU184451
length 265
lncRNA type inter_gene
GC content 0.40
exon number 1
gene id G146607
representative True

Chromosome Information

Item Value
chromosome id CM030140.1
NCBI id CM030140.1
chromosome length 22460246
location 20599239 ~ 20599503 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

TTTAGAGtcaaattcattaatttacatgTATAGTGAATCTGAGTGAAGCAGGAGTAACAGGACAGATGCcgttattaatacattttattgtaacaCTGTTCCTACCTGACCCCAAATTGTTACCGGCAGTTGGATGATTTCTTCAAAGTTCTTCAGCATCTCGAGAAAGTGTCCGTCGTCGTATTCAAACCTGTGCCCAAAAACCAGGGAGCAGATGATGTTCGACACTCCGTTGTGAAGTAAGTAGTGAGGATCAAAGGGTTTT

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU184408 lncRNA downstream 64039 20534368 ~ 20535200 (-) True G146578
TU184406 lncRNA downstream 75421 20521649 ~ 20523818 (-) True G146576
TU184402 lncRNA downstream 104828 20492171 ~ 20494411 (-) False AMCG00005276
TU184375 lncRNA downstream 277619 20316060 ~ 20321620 (-) True AMCG00005270
TU184317 lncRNA downstream 451885 20146085 ~ 20147354 (-) True G146503
TU184453 lncRNA upstream 671 20600174 ~ 20600514 (-) True G146609
TU184476 lncRNA upstream 34621 20634124 ~ 20636209 (-) True G146623
TU184485 lncRNA upstream 95312 20694815 ~ 20707606 (-) True G146631
TU184511 lncRNA upstream 157453 20756956 ~ 20757321 (-) True G146652
TU184568 lncRNA upstream 258097 20857600 ~ 20857802 (-) True G146702
AMCG00005275 mRNA downstream 51872 20542102 ~ 20547367 (-) True AMCG00005275
AMCG00005277 mRNA downstream 73938 20524046 ~ 20525301 (-) True AMCG00005277
AMCG00005276 mRNA downstream 97033 20491051 ~ 20502206 (-) True AMCG00005276
AMCG00005271 mRNA downstream 207678 20370668 ~ 20391561 (-) True AMCG00005271
AMCG00005270 mRNA downstream 260074 20320591 ~ 20339165 (-) False AMCG00005270
AMCG00005294 mRNA upstream 40155 20639658 ~ 20643224 (-) True AMCG00005294
AMCG00005295 mRNA upstream 48053 20647556 ~ 20677947 (-) True AMCG00005295
AMCG00005293 mRNA upstream 109283 20708786 ~ 20709969 (-) True AMCG00005293
AMCG00005291 mRNA upstream 124375 20723878 ~ 20735082 (-) True AMCG00005291
AMCG00005296 mRNA upstream 146937 20746440 ~ 20751899 (-) True AMCG00005296
TU184357 other downstream 319493 20274391 ~ 20279746 (-) True G146532
TU184245 other downstream 575732 20020710 ~ 20023507 (-) False AMCG00005256
TU184246 other downstream 575732 20020710 ~ 20023507 (-) False AMCG00005256
TU184128 other downstream 837793 19758232 ~ 19761446 (-) True AMCG00005240
TU184064 other downstream 1025921 19570059 ~ 19573318 (-) True G146313
TU184470 other upstream 9851 20609354 ~ 20610643 (-) True G146618
TU184860 other upstream 1145373 21744876 ~ 21745453 (-) True G146938
TU185079 other upstream 1371532 21971035 ~ 21982521 (-) True AMCG00005363
TU185101 other upstream 1431322 22030825 ~ 22035272 (-) False AMCG00005362
TU185105 other upstream 1437092 22036595 ~ 22101862 (-) True G147109

Expression Profile