RNA id: TU184567


Basic Information

Item Value
RNA id TU184567
length 208
lncRNA type inter_gene
GC content 0.57
exon number 1
gene id G146701
representative True

Chromosome Information

Item Value
chromosome id CM030140.1
NCBI id CM030140.1
chromosome length 22460246
location 20855711 ~ 20855918 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

CTCCTGTAGTTCCTGTATTCCTCCACCCTGTGGCAGCAAAGATGATTTATTCCATTGCATTTGGAGCTGCAAACCCCTTCCTGCTCGGACTCCCCCGGGCCGAGGCAACCAGAACTCCTCTGACCCGCGACCCCCACAAGAAAGGATACTCTCGTCTGCCGTGCCCCGCCCCTCGCATCTCCCTCCGAGTTAGTCACATGTCAAGAAT

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU184498 lncRNA upstream 104773 20750304 ~ 20750938 (+) True G146640
TU184443 lncRNA upstream 117390 20682625 ~ 20738321 (+) False G146599
TU184428 lncRNA upstream 143491 20642772 ~ 20712220 (+) False G146591
TU184442 lncRNA upstream 171727 20682625 ~ 20683984 (+) True G146599
TU184435 lncRNA upstream 185542 20666083 ~ 20670169 (+) False G146596
TU184569 lncRNA downstream 11288 20867206 ~ 20867406 (+) True G146703
TU184620 lncRNA downstream 208055 21063973 ~ 21064908 (+) True G146749
TU184664 lncRNA downstream 470614 21326532 ~ 21328902 (+) True G146782
TU184706 lncRNA downstream 542758 21398676 ~ 21398971 (+) True G146815
TU184834 lncRNA downstream 854439 21710357 ~ 21712783 (+) True G146915
AMCG00005284 mRNA upstream 1681 20850904 ~ 20854030 (+) True AMCG00005284
AMCG00005283 mRNA upstream 40961 20807201 ~ 20814750 (+) True AMCG00005283
AMCG00005281 mRNA upstream 49330 20803621 ~ 20806381 (+) True AMCG00005281
AMCG00005280 mRNA upstream 52514 20797568 ~ 20803197 (+) True AMCG00005280
AMCG00005282 mRNA upstream 61691 20781308 ~ 20794020 (+) True AMCG00005282
AMCG00005302 mRNA downstream 166286 21022204 ~ 21031993 (+) True AMCG00005302
AMCG00005303 mRNA downstream 194559 21050477 ~ 21059289 (+) True AMCG00005303
AMCG00005311 mRNA downstream 547556 21403474 ~ 21457237 (+) True AMCG00005311
AMCG00005325 mRNA downstream 609650 21465568 ~ 21479216 (+) True AMCG00005325
AMCG00005326 mRNA downstream 643490 21499408 ~ 21509612 (+) True AMCG00005326
TU184526 other upstream 52531 20797458 ~ 20803180 (+) False AMCG00005280
TU184446 other upstream 153307 20699486 ~ 20702404 (+) True AMCG00005286
TU184436 other upstream 185542 20661926 ~ 20670169 (+) True G146596
TU184405 other upstream 330892 20521649 ~ 20524819 (+) True G146575
TU184347 other upstream 575925 20273513 ~ 20279786 (+) False AMCG00005272
TU184679 other downstream 481514 21337432 ~ 21340712 (+) True G146790
TU184762 other downstream 714612 21570530 ~ 21572321 (+) True AMCG00005329
TU184830 other downstream 824790 21680708 ~ 21704394 (+) True AMCG00005340
TU184875 other downstream 955814 21811732 ~ 21848136 (+) True G146952
TU184903 other downstream 1029352 21885270 ~ 21887445 (+) False AMCG00005345

Expression Profile