RNA id: TU184568


Basic Information

Item Value
RNA id TU184568
length 203
lncRNA type inter_gene
GC content 0.49
exon number 1
gene id G146702
representative True

Chromosome Information

Item Value
chromosome id CM030140.1
NCBI id CM030140.1
chromosome length 22460246
location 20857600 ~ 20857802 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ctgtctaacacgtcggtccagaatctcccataggtgttcagttgggttgagatctggtgactgtgaaggccatagcatatgagttgcatcattttcatactcatcagaccattcagtgacccacgtgccctgtggatggggcattgtcatcctggaagagaccactcccatcaggagagaaatgttccaccataggataaagg

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU184511 lncRNA downstream 100279 20756956 ~ 20757321 (-) True G146652
TU184485 lncRNA downstream 149994 20694815 ~ 20707606 (-) True G146631
TU184476 lncRNA downstream 221391 20634124 ~ 20636209 (-) True G146623
TU184453 lncRNA downstream 257086 20600174 ~ 20600514 (-) True G146609
TU184451 lncRNA downstream 258097 20599239 ~ 20599503 (-) True G146607
TU184704 lncRNA upstream 523504 21381306 ~ 21381569 (-) True G146813
TU184738 lncRNA upstream 628147 21485949 ~ 21487711 (-) True AMCG00005333
TU184761 lncRNA upstream 702247 21560049 ~ 21561461 (-) True G146857
TU184798 lncRNA upstream 732194 21589996 ~ 21606535 (-) True G146891
TU184859 lncRNA upstream 887742 21745544 ~ 21745808 (-) False AMCG00005343
AMCG00005285 mRNA downstream 7998 20814843 ~ 20849602 (-) True AMCG00005285
AMCG00005289 mRNA downstream 77082 20769036 ~ 20780518 (-) True AMCG00005289
AMCG00005290 mRNA downstream 96770 20757391 ~ 20760830 (-) True AMCG00005290
AMCG00005292 mRNA downstream 102106 20752234 ~ 20755494 (-) True AMCG00005292
AMCG00005296 mRNA downstream 105701 20746440 ~ 20751899 (-) True AMCG00005296
AMCG00005305 mRNA upstream 125064 20982866 ~ 20999934 (-) True AMCG00005305
AMCG00005304 mRNA upstream 176990 21034792 ~ 21049355 (-) True AMCG00005304
AMCG00005297 mRNA upstream 201507 21059309 ~ 21067609 (-) True AMCG00005297
AMCG00005299 mRNA upstream 211470 21069272 ~ 21085318 (-) True AMCG00005299
AMCG00005300 mRNA upstream 228783 21086585 ~ 21095144 (-) True AMCG00005300
TU184470 other downstream 246957 20609354 ~ 20610643 (-) True G146618
TU184357 other downstream 577854 20274391 ~ 20279746 (-) True G146532
TU184245 other downstream 834093 20020710 ~ 20023507 (-) False AMCG00005256
TU184246 other downstream 834093 20020710 ~ 20023507 (-) False AMCG00005256
TU184128 other downstream 1096154 19758232 ~ 19761446 (-) True AMCG00005240
TU184860 other upstream 887074 21744876 ~ 21745453 (-) True G146938
TU185079 other upstream 1113233 21971035 ~ 21982521 (-) True AMCG00005363
TU185101 other upstream 1173023 22030825 ~ 22035272 (-) False AMCG00005362
TU185105 other upstream 1178793 22036595 ~ 22101862 (-) True G147109
TU185104 other upstream 1225915 22083717 ~ 22084944 (-) True G147108

Expression Profile