RNA id: TU184569



Basic Information


Item Value
RNA id TU184569
length 201
lncRNA type inter_gene
GC content 0.30
exon number 1
gene id G146703
representative True

Chromosome Information


Item Value
chromosome id CM030140.1
NCBI id CM030140.1
chromosome length 22460246
location 20867206 ~ 20867406 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


aaaaaaatagttaaattatgAGTGTAatcgtacattttcaaaatacattgtttaaatgtaatacctGCTGACACAACggtttttaactttgttatatTCCACGACTTTTATTTAagcattatacaaatcaaatgttttaatgtagatagACTACGAGTGACATCTGAAGtcaatggctgtatttgaagccgcatactaccc

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU184567 lncRNA upstream 11288 20855711 ~ 20855918 (+) True G146701
TU184498 lncRNA upstream 116268 20750304 ~ 20750938 (+) True G146640
TU184443 lncRNA upstream 128885 20682625 ~ 20738321 (+) False G146599
TU184428 lncRNA upstream 154986 20642772 ~ 20712220 (+) False G146591
TU184620 lncRNA downstream 196567 21063973 ~ 21064908 (+) True G146749
TU184664 lncRNA downstream 459126 21326532 ~ 21328902 (+) True G146782
TU184706 lncRNA downstream 531270 21398676 ~ 21398971 (+) True G146815
TU184834 lncRNA downstream 842951 21710357 ~ 21712783 (+) True G146915
TU184849 lncRNA downstream 877473 21744879 ~ 21745451 (+) True G146928
AMCG00005284 mRNA upstream 13176 20850904 ~ 20854030 (+) True AMCG00005284
AMCG00005283 mRNA upstream 52456 20807201 ~ 20814750 (+) True AMCG00005283
AMCG00005281 mRNA upstream 60825 20803621 ~ 20806381 (+) True AMCG00005281
AMCG00005280 mRNA upstream 64009 20797568 ~ 20803197 (+) True AMCG00005280
AMCG00005282 mRNA upstream 73186 20781308 ~ 20794020 (+) True AMCG00005282
AMCG00005302 mRNA downstream 154798 21022204 ~ 21031993 (+) True AMCG00005302
AMCG00005303 mRNA downstream 183071 21050477 ~ 21059289 (+) True AMCG00005303
AMCG00005311 mRNA downstream 536068 21403474 ~ 21457237 (+) True AMCG00005311
AMCG00005325 mRNA downstream 598162 21465568 ~ 21479216 (+) True AMCG00005325
AMCG00005326 mRNA downstream 632002 21499408 ~ 21509612 (+) True AMCG00005326
TU184526 other upstream 64026 20797458 ~ 20803180 (+) False AMCG00005280
TU184446 other upstream 164802 20699486 ~ 20702404 (+) True AMCG00005286
TU184436 other upstream 197037 20661926 ~ 20670169 (+) True G146596
TU184405 other upstream 342387 20521649 ~ 20524819 (+) True G146575
TU184347 other upstream 587420 20273513 ~ 20279786 (+) False AMCG00005272
TU184679 other downstream 470026 21337432 ~ 21340712 (+) True G146790
TU184762 other downstream 703124 21570530 ~ 21572321 (+) True AMCG00005329
TU184830 other downstream 813302 21680708 ~ 21704394 (+) True AMCG00005340
TU184875 other downstream 944326 21811732 ~ 21848136 (+) True G146952
TU184903 other downstream 1017864 21885270 ~ 21887445 (+) False AMCG00005345

Expression Profile