RNA id: TU184704


Basic Information

Item Value
RNA id TU184704
length 264
lncRNA type inter_gene
GC content 0.34
exon number 1
gene id G146813
representative True

Chromosome Information

Item Value
chromosome id CM030140.1
NCBI id CM030140.1
chromosome length 22460246
location 21381306 ~ 21381569 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

CctgtctgcattttttattatatattttaatccaaAAAATCGTTGACGTGCCGTGAATTTTATTCAGAGCTGTAAGATGGGACTGGAAAAGCCGAAGAGTCTTGATTGAAACTGCAATTGAAAGTCAAGGTTGGCTGCATCAAGGAGGAGAACAAAAGTCATGTTTTGAGACACTATTTTTagtttagtgtttgttttttacacaaaaGATGGTTAACCAAATGATTTGGCTCACAAAAAAGAATTCTGTAGATAAAATGAAAC

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU184568 lncRNA downstream 523504 20857600 ~ 20857802 (-) True G146702
TU184511 lncRNA downstream 623985 20756956 ~ 20757321 (-) True G146652
TU184485 lncRNA downstream 673700 20694815 ~ 20707606 (-) True G146631
TU184476 lncRNA downstream 745097 20634124 ~ 20636209 (-) True G146623
TU184453 lncRNA downstream 780792 20600174 ~ 20600514 (-) True G146609
TU184738 lncRNA upstream 104380 21485949 ~ 21487711 (-) True AMCG00005333
TU184761 lncRNA upstream 178480 21560049 ~ 21561461 (-) True G146857
TU184798 lncRNA upstream 208427 21589996 ~ 21606535 (-) True G146891
TU184859 lncRNA upstream 363975 21745544 ~ 21745808 (-) False AMCG00005343
TU184873 lncRNA upstream 425411 21806980 ~ 21807306 (-) True G146951
AMCG00005310 mRNA downstream 42078 21338245 ~ 21339228 (-) True AMCG00005310
AMCG00005306 mRNA downstream 47770 21331248 ~ 21333536 (-) True AMCG00005306
AMCG00005309 mRNA downstream 51316 21327357 ~ 21329990 (-) True AMCG00005309
AMCG00005307 mRNA downstream 55211 21317619 ~ 21326095 (-) True AMCG00005307
AMCG00005308 mRNA downstream 64321 21310065 ~ 21316985 (-) True AMCG00005308
AMCG00005312 mRNA upstream 75839 21457408 ~ 21462473 (-) True AMCG00005312
AMCG00005333 mRNA upstream 104577 21486146 ~ 21486358 (-) False AMCG00005333
AMCG00005331 mRNA upstream 122596 21504165 ~ 21521031 (-) True AMCG00005331
AMCG00005332 mRNA upstream 164866 21546435 ~ 21548854 (-) True AMCG00005332
AMCG00005334 mRNA upstream 167288 21548857 ~ 21551959 (-) True AMCG00005334
TU184470 other downstream 770663 20609354 ~ 20610643 (-) True G146618
TU184357 other downstream 1101560 20274391 ~ 20279746 (-) True G146532
TU184245 other downstream 1357799 20020710 ~ 20023507 (-) False AMCG00005256
TU184246 other downstream 1357799 20020710 ~ 20023507 (-) False AMCG00005256
TU184128 other downstream 1619860 19758232 ~ 19761446 (-) True AMCG00005240
TU184860 other upstream 363307 21744876 ~ 21745453 (-) True G146938
TU185079 other upstream 589466 21971035 ~ 21982521 (-) True AMCG00005363
TU185101 other upstream 649256 22030825 ~ 22035272 (-) False AMCG00005362
TU185105 other upstream 655026 22036595 ~ 22101862 (-) True G147109
TU185104 other upstream 702148 22083717 ~ 22084944 (-) True G147108

Expression Profile