RNA id: TU184988


Basic Information

Item Value
RNA id TU184988
length 424
lncRNA type inter_gene
GC content 0.72
exon number 2
gene id G147027
representative True

Chromosome Information

Item Value
chromosome id CM030140.1
NCBI id CM030140.1
chromosome length 22460246
location 21956601 ~ 21957045 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

AGCCAACCTGTCTCCGCCGGTCCCTTCGCTCTCCTCCGCCGCTCTGGCCGGTCCGGGCGTCTCGTACGGGTCCGCTCTCGCTCTCGGCGCGGCCGGGCGGAGCACAATAGCGAGCTGCTGCGGGGCCCTGTGCTGCCTGTCTCGCTGTCCCTGGCTGGCCGCCTGCGTCGCTCCGGTGCGCGGTGTCGGTGCCGCTGCTGTGTCCGGGGTCGGGTCGGGTCTGGAGACGCGGCGGTTCCGCTCAGTGAGGCCCCGCTCGCCGCGGCCTGTCGCACAATCAAAGATGGCAGAGCGCCAATGGACGAGCGCCTGACGTCATCGCGTCGGGACGGCGGCAGCGGGACAGAAAGCGGCTCCTCCCCTCGCCGCCTGTGACGTCACCACCGCCGTTCCTGTTCCTCCCTGGCAGCCAATCAGCGGCGAG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU184985 lncRNA upstream 6014 21950328 ~ 21950587 (+) True G147024
TU184983 lncRNA upstream 7983 21948086 ~ 21948618 (+) True G147022
TU184849 lncRNA upstream 211150 21744879 ~ 21745451 (+) True G146928
TU184834 lncRNA upstream 243818 21710357 ~ 21712783 (+) True G146915
TU184706 lncRNA upstream 557630 21398676 ~ 21398971 (+) True G146815
TU185037 lncRNA downstream 124599 22081644 ~ 22087344 (+) True G147066
AMCG00005350 mRNA upstream 19274 21932366 ~ 21937327 (+) True AMCG00005350
AMCG00005348 mRNA upstream 28128 21920884 ~ 21928473 (+) True AMCG00005348
AMCG00005349 mRNA upstream 36704 21917115 ~ 21919897 (+) True AMCG00005349
AMCG00005345 mRNA upstream 69033 21883199 ~ 21887568 (+) True AMCG00005345
AMCG00005344 mRNA upstream 78067 21873027 ~ 21878534 (+) True AMCG00005344
AMCG00005351 mRNA downstream 9813 21966858 ~ 21969666 (+) True AMCG00005351
AMCG00005356 mRNA downstream 63817 22020862 ~ 22024488 (+) True AMCG00005356
AMCG00005358 mRNA downstream 67478 22024523 ~ 22031098 (+) True AMCG00005358
AMCG00005357 mRNA downstream 103164 22060209 ~ 22061467 (+) True AMCG00005357
AMCG00005364 mRNA downstream 159444 22116489 ~ 22122971 (+) True AMCG00005364
TU184986 other upstream 3719 21952569 ~ 21952882 (+) True G147025
TU184980 other upstream 8610 21945558 ~ 21947991 (+) True G147021
TU184903 other upstream 69156 21885270 ~ 21887445 (+) False AMCG00005345
TU184875 other upstream 108465 21811732 ~ 21848136 (+) True G146952
TU184830 other upstream 252207 21680708 ~ 21704394 (+) True AMCG00005340
TU184992 other downstream 395 21957440 ~ 21984144 (+) True G147029
TU184996 other downstream 11257 21968302 ~ 21969692 (+) False AMCG00005351
TU185050 other downstream 182142 22139187 ~ 22144833 (+) False AMCG00005365
TU185051 other downstream 182142 22139187 ~ 22144833 (+) False AMCG00005365

Expression Profile