RNA id: TU185198


Basic Information

Item Value
RNA id TU185198
length 382
lncRNA type inter_gene
GC content 0.66
exon number 1
gene id G147185
representative True

Chromosome Information

Item Value
chromosome id CM030140.1
NCBI id CM030140.1
chromosome length 22460246
location 22425725 ~ 22426106 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ctctctcagggtcaGTACCTCTCCAGCAAGTACTGTGCCAGCTCAGAGTGCAGACTGAAGCCCAGCCGGTCCTTCAGCTCCCCCCAGCTCTGCAGACAGGCGCCCAGTCGGACCCGGGACTTGCTCCTGCGTGCATCCAGCTCCCGTCGCCGCTGCCTGCGCACTGCGTCCCGCAACGATGACATCACCACTTCCGAGACGCCGCTCACGGGTCACCCTGCAGCAGGCACCCCCCTCGGAGAACCGCCAGGACTGGGGGGCGATCACACAGCTGCCGTGGTGCTAAGGGCTCCTGCAGGACACAGTGACCGGGCTGAGCTCTCTCTGAACTCAACCGAGCGCCAGCATCCCAGAGCAGCTCTACGACAGCGCCAGCAGCCGG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU185197 lncRNA downstream 2495 22422989 ~ 22423230 (-) True G147184
TU185169 lncRNA downstream 195734 22229199 ~ 22229991 (-) True G147156
TU185126 lncRNA downstream 244793 22132266 ~ 22180932 (-) True G147122
TU185082 lncRNA downstream 443204 21982058 ~ 21982521 (-) False AMCG00005363
TU184873 lncRNA downstream 618419 21806980 ~ 21807306 (-) True G146951
AMCG00005373 mRNA downstream 3709 22416920 ~ 22422016 (-) True AMCG00005373
AMCG00005375 mRNA downstream 30303 22394314 ~ 22395422 (-) True AMCG00005375
AMCG00005374 mRNA downstream 57663 22363594 ~ 22368062 (-) True AMCG00005374
AMCG00005382 mRNA downstream 202348 22215959 ~ 22223377 (-) True AMCG00005382
AMCG00005368 mRNA downstream 267320 22147047 ~ 22158405 (-) True AMCG00005368
TU185150 other downstream 226957 22195366 ~ 22198768 (-) True G147143
TU185128 other downstream 267310 22145701 ~ 22158415 (-) True G147124
TU185123 other downstream 295176 22127907 ~ 22130549 (-) True G147121
TU185105 other downstream 323863 22036595 ~ 22101862 (-) True G147109

Expression Profile