RNA id: AMCG00005418



Basic Information


Item Value
RNA id AMCG00005418
length 270
RNA type mRNA
GC content 0.59
exon number 2
gene id AMCG00005418
representative False

Chromosome Information


Item Value
chromosome id CM030142.1
NCBI id CM030142.1
chromosome length 21087710
location 1376468 ~ 1379302 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


ATGGCAGACGAGAAACTGAAGGTGGCGCGGGTGAAGCTGGTGAAGGGTCTGAACAGGGCGGTGCTCAACAACCTACTGGACCGTCTCCAGGATGCGAGGGTGTTCAACCCGTCGGAGGCAGAGTTGGTGCTTGAGGGCCGCAGCACCACTATGGAAAAGGCGCGGGGCTTGGTGGACATGGTGGTGAAGAAAGGGCCGGTGGCCAGCGAGATATTCTTCAGGTGCCTGGAGGAGGAAGACGCCATACTCCACAGCACTCTGAAGCTCTGA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU191523 lncRNA upstream 122817 1245031 ~ 1253959 (+) True G152111
TU191451 lncRNA upstream 319381 1057185 ~ 1057395 (+) True G152053
TU191435 lncRNA upstream 362396 1014078 ~ 1014380 (+) True G152040
TU191346 lncRNA upstream 685840 690659 ~ 690936 (+) True G151978
TU191335 lncRNA upstream 840084 535895 ~ 536692 (+) True G151968
TU191630 lncRNA downstream 79270 1458154 ~ 1458747 (+) True G152196
TU191632 lncRNA downstream 82840 1461724 ~ 1461939 (+) True G152198
TU191670 lncRNA downstream 130618 1509502 ~ 1515952 (+) False AMCG00005434
TU191834 lncRNA downstream 550571 1929455 ~ 1946800 (+) False AMCG00005429
TU191902 lncRNA downstream 876481 2255365 ~ 2323345 (+) True G152397
AMCG00005416 mRNA upstream 17253 1342760 ~ 1359523 (+) True AMCG00005416
AMCG00005412 mRNA upstream 54181 1321808 ~ 1322595 (+) True AMCG00005412
AMCG00005414 mRNA upstream 71704 1301037 ~ 1305072 (+) True AMCG00005414
AMCG00005415 mRNA upstream 81328 1284287 ~ 1295448 (+) True AMCG00005415
AMCG00005411 mRNA upstream 118651 1255042 ~ 1258125 (+) True AMCG00005411
AMCG00005413 mRNA downstream 2857 1381741 ~ 1384590 (+) True AMCG00005413
AMCG00005424 mRNA downstream 9804 1388688 ~ 1402701 (+) True AMCG00005424
AMCG00005425 mRNA downstream 24162 1403046 ~ 1406537 (+) True AMCG00005425
AMCG00005422 mRNA downstream 29549 1408433 ~ 1425336 (+) True AMCG00005422
AMCG00005423 mRNA downstream 90292 1469176 ~ 1480171 (+) True AMCG00005423
TU191585 other upstream 8820 1367014 ~ 1367956 (+) True G152159
TU191336 other upstream 839413 536751 ~ 537363 (+) True G151969
TU191334 other upstream 976911 398925 ~ 399865 (+) True G151967
TU191729 other downstream 367076 1745960 ~ 1748934 (+) True G152267
TU191823 other downstream 420927 1799811 ~ 1803903 (+) True G152337
TU192049 other downstream 1125026 2503910 ~ 2510676 (+) True AMCG00005481
TU192048 other downstream 1125109 2503993 ~ 2510676 (+) False AMCG00005481
TU192155 other downstream 1466333 2845217 ~ 2849608 (+) True G152588

Expression Profile