RNA id: AMCG00005633


Basic Information

Item Value
RNA id AMCG00005633
length 390
RNA type mRNA
GC content 0.58
exon number 2
gene id AMCG00005633
representative True

Chromosome Information

Item Value
chromosome id CM030142.1
NCBI id CM030142.1
chromosome length 21087710
location 6939812 ~ 6944352 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGTCTTCACCCGGCAGCCAGGAGACTGATGGAGGGCGCGGTGAGAGGTCTTCTCTTCCACTTGGCAACACCGGGGTCATGGGGGTGAAATCCCAGAAGCGGCAGCAGCAGCCATGGCAGGCTTTCTCGGAGAGTCAGGCTGAGAGAGTTgatggggggggtttctTCATCATGGCCGCCGGGCTGCTGGTGTACCCTTTCGGACTGAGCTCCACCTTGGTGAAGTCATTCTGTGGGAACTCGAGCATCTACTATGCCGGGGAGTGCCAGATCGGGTGGGGCTACATGCTGGCCATCGTGGGAGTGATGCTCACACTGTTCCTGCCCTTCTTTGCAAAATATGCACCTAAAGAGCATGCGTCTCCAACCCCCCTGCCCACCATTTTATAG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU193418 lncRNA downstream 4136 6935430 ~ 6935676 (-) True G153586
TU193332 lncRNA downstream 277316 6647316 ~ 6662496 (-) True G153514
TU193273 lncRNA downstream 376242 6560939 ~ 6563570 (-) True G153487
TU193274 lncRNA downstream 376242 6562176 ~ 6563570 (-) False G153487
TU193131 lncRNA downstream 682640 6240402 ~ 6257172 (-) True G153379
TU193473 lncRNA upstream 108453 7052805 ~ 7053559 (-) True G153638
TU193483 lncRNA upstream 194828 7139180 ~ 7139794 (-) False AMCG00005685
TU193533 lncRNA upstream 235276 7179628 ~ 7202286 (-) True G153678
TU193539 lncRNA upstream 334152 7278504 ~ 7278765 (-) True G153681
TU193615 lncRNA upstream 930435 7874787 ~ 7875042 (-) True G153742
AMCG00005631 mRNA downstream 7946 6924049 ~ 6931866 (-) True AMCG00005631
AMCG00005632 mRNA downstream 18951 6909318 ~ 6920861 (-) True AMCG00005632
AMCG00005655 mRNA downstream 66946 6825929 ~ 6872866 (-) True AMCG00005655
AMCG00005654 mRNA downstream 138973 6787860 ~ 6800839 (-) True AMCG00005654
AMCG00005645 mRNA downstream 196591 6722947 ~ 6743221 (-) True AMCG00005645
AMCG00005678 mRNA upstream 72196 7016548 ~ 7016940 (-) True AMCG00005678
AMCG00005676 mRNA upstream 73593 7017945 ~ 7022898 (-) True AMCG00005676
AMCG00005677 mRNA upstream 79833 7024185 ~ 7037056 (-) True AMCG00005677
AMCG00005680 mRNA upstream 93331 7037683 ~ 7048482 (-) True AMCG00005680
AMCG00005679 mRNA upstream 109358 7053710 ~ 7077304 (-) True AMCG00005679
TU193235 other downstream 443241 6490255 ~ 6496571 (-) True AMCG00005674
TU193087 other downstream 856946 6081235 ~ 6082866 (-) True G153342
TU192831 other downstream 1637614 5300769 ~ 5302198 (-) True G153130
TU192573 other downstream 2649920 4288665 ~ 4289892 (-) False AMCG00005539
TU192222 other downstream 3849098 3071860 ~ 3090714 (-) False G152645
TU193605 other upstream 841202 7785554 ~ 7788321 (-) True G153733
TU193670 other upstream 1054984 7999336 ~ 8001340 (-) False AMCG00005704
TU193709 other upstream 1147396 8091748 ~ 8124685 (-) True G153806
TU194148 other upstream 2146070 9090422 ~ 9092573 (-) True G154142
TU194289 other upstream 2480938 9425290 ~ 9434940 (-) True G154250

Expression Profile