RNA id: AMCG00005674



Basic Information


Item Value
RNA id AMCG00005674
length 408
RNA type mRNA
GC content 0.51
exon number 1
gene id AMCG00005674
representative False

Chromosome Information


Item Value
chromosome id CM030142.1
NCBI id CM030142.1
chromosome length 21087710
location 6490255 ~ 6496571 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


ATGAGCGAGCTGAACTACTCGGAACAGGACCAGTCGGAAGCGACGGAGACGACGACATTCACCCTGGAAACGGATGACACGCCGAGCGAGGATGGGCCCTCAAAGACCAAGTCCAGCAAGAAGTCCCTGCTGCCGTCCCCCTTTGGCATCTGTGACTCGGACAGCAGCAAAGTGCCCATGGACACAGACTATCAAGAAGAAGTCAAATGGGAGCCCAAAGTCAGGATCAAATCAGATGTGTTCGGGGGAGTTAAAAGGCAGAACTCAGCCGGGAGGTTTGACATGAATAGGCTGTTTGAGGCAGTGGCCAGCAGGGATGTCAGTCAACTGGATGGTTTACACGACTATCTCCGTCTAAATGTAATGAAACTCACACATTCCAAATTAAGAGGTAAGGGTGAGGATTGA

Function


GO:      GO:0044765

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU193131 lncRNA downstream 233736 6240402 ~ 6257172 (-) True G153379
TU193126 lncRNA downstream 255499 6235183 ~ 6235409 (-) True G153375
TU193125 lncRNA downstream 256050 6234548 ~ 6234858 (-) True G153374
TU193124 lncRNA downstream 256549 6234128 ~ 6234359 (-) True G153373
TU193123 lncRNA downstream 256880 6232166 ~ 6234028 (-) True AMCG00005628
TU193273 lncRNA upstream 69624 6560939 ~ 6563570 (-) True G153487
TU193274 lncRNA upstream 70861 6562176 ~ 6563570 (-) False G153487
TU193332 lncRNA upstream 156001 6647316 ~ 6662496 (-) True G153514
TU193418 lncRNA upstream 444115 6935430 ~ 6935676 (-) True G153586
TU193473 lncRNA upstream 561490 7052805 ~ 7053559 (-) True G153638
AMCG00005673 mRNA downstream 4658 6481066 ~ 6486250 (-) True AMCG00005673
AMCG00005651 mRNA downstream 48542 6433714 ~ 6442366 (-) True AMCG00005651
AMCG00005652 mRNA downstream 58611 6425603 ~ 6432297 (-) True AMCG00005652
AMCG00005653 mRNA downstream 92399 6390296 ~ 6398509 (-) True AMCG00005653
AMCG00005641 mRNA downstream 151075 6334287 ~ 6339833 (-) True AMCG00005641
AMCG00005675 mRNA upstream 6045 6497360 ~ 6497661 (-) True AMCG00005675
AMCG00005671 mRNA upstream 11138 6502453 ~ 6527620 (-) True AMCG00005671
AMCG00005672 mRNA upstream 37252 6528567 ~ 6545880 (-) True AMCG00005672
AMCG00005665 mRNA upstream 79742 6571057 ~ 6575631 (-) True AMCG00005665
AMCG00005664 mRNA upstream 91384 6582699 ~ 6594894 (-) True AMCG00005664
TU193087 other downstream 408042 6081235 ~ 6082866 (-) True G153342
TU192831 other downstream 1188710 5300769 ~ 5302198 (-) True G153130
TU192573 other downstream 2201016 4288665 ~ 4289892 (-) False AMCG00005539
TU192222 other downstream 3400194 3071860 ~ 3090714 (-) False G152645
TU192197 other downstream 3614899 2875286 ~ 2876009 (-) False AMCG00005491
TU193605 other upstream 1294239 7785554 ~ 7788321 (-) True G153733
TU193670 other upstream 1508021 7999336 ~ 8001340 (-) False AMCG00005704
TU193709 other upstream 1600433 8091748 ~ 8124685 (-) True G153806
TU194148 other upstream 2599107 9090422 ~ 9092573 (-) True G154142
TU194289 other upstream 2933975 9425290 ~ 9434940 (-) True G154250

Expression Profile