RNA id: AMCG00005701


Basic Information

Item Value
RNA id AMCG00005701
length 813
RNA type mRNA
GC content 0.59
exon number 6
gene id AMCG00005701
representative True

Chromosome Information

Item Value
chromosome id CM030142.1
NCBI id CM030142.1
chromosome length 21087710
location 8023532 ~ 8025712 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGGTGGGGAGGGAGCCTGTGAGTTTGTCCTACGATGTTTTCGACGGCAAGACCACCGACACCCCCTTGGTGTTCCTCCACGGGCTGTTCGGCAGCAAGTCCAACTTCCACTCAATAGCCAAGTCCCTGGTGCAGCGGACTGGGAGGAAGGTGTTGACGGTGGATGCTCGAAATCATGGCAACAGCAACCACAGCCCCTTGCTGACCTACGAGGCCATGACCAACGACCTGCACCACCTGCTGAAGCAGCTGCACATCGGCAAGTGCGTCCTGATTGGCCACAGCATGGGAGGGAAGGTGGCCATGTCATCTGCTCTGCAACAGCCTGACCTGGTGGAGCGCCTGGTGGTGGTGGACATCAGCCCAAGGAGGACGACCATGCAGACCGACTTCCCGCACTACATCCAGGCCATGAAAGCGGTGAAGATCGAGTGCCACATCCCCAGGTCCACGGCCAGGAGGCTGGCTGAGGACCAGCTGCGCGCGCTGGTGAAGAAACGCTCCGTGAGGCAGTTTCTCCTGACCAACCTGGTCGAGCAAAACGGCCATTACACCTGGAGGGTGAACCTGGATGCCATCGCTGACCATCTGGACGACGTGCTGGACTTCCCTCACTTCGACAACAGCTATGAAGGTCCGACGCTCTTTCTGGGGGGAAGTAGCTCTCACTACATCAGCTCTGACGACTACCCCGAGATCCAGCGCTTGTTCCCCATGGCCGATATCCAGTACATCCCCGACGCCAGCCACTGGATCCATGCGGACAAACCTCTGGACTTCATCAGCTCCGTCTGCTCCTTTCTGCAGTCGTAG

Function

GO: NA

KEGG:

id description
K13703 ABHD11; abhydrolase domain-containing protein 11

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU193663 lncRNA downstream 1892 7984240 ~ 8021640 (-) True G153779
TU193660 lncRNA downstream 39601 7982030 ~ 7983931 (-) True G153778
TU193615 lncRNA downstream 148490 7874787 ~ 7875042 (-) True G153742
TU193539 lncRNA downstream 744767 7278504 ~ 7278765 (-) True G153681
TU193533 lncRNA downstream 821246 7179628 ~ 7202286 (-) True G153678
TU193946 lncRNA upstream 548480 8574192 ~ 8588222 (-) True G153980
TU193982 lncRNA upstream 704091 8729803 ~ 8730149 (-) True G154010
TU194132 lncRNA upstream 961569 8987281 ~ 9024879 (-) True G154126
TU194160 lncRNA upstream 1069959 9095671 ~ 9103798 (-) False G154150
TU194161 lncRNA upstream 1069959 9095671 ~ 9108363 (-) True G154150
AMCG00005704 mRNA downstream 22127 7999342 ~ 8001405 (-) True AMCG00005704
AMCG00005702 mRNA downstream 24432 7989356 ~ 7999100 (-) True AMCG00005702
AMCG00005717 mRNA downstream 45752 7976058 ~ 7977780 (-) True AMCG00005717
AMCG00005716 mRNA downstream 57272 7954131 ~ 7966260 (-) True AMCG00005716
AMCG00005715 mRNA downstream 73398 7918679 ~ 7950134 (-) True AMCG00005715
AMCG00005703 mRNA upstream 11316 8037028 ~ 8066223 (-) True AMCG00005703
AMCG00005734 mRNA upstream 77233 8102945 ~ 8104214 (-) True AMCG00005734
AMCG00005733 mRNA upstream 78754 8104466 ~ 8107046 (-) True AMCG00005733
AMCG00005706 mRNA upstream 320448 8346160 ~ 8363063 (-) True AMCG00005706
AMCG00005724 mRNA upstream 351524 8377236 ~ 8398525 (-) True AMCG00005724
TU193670 other downstream 22192 7999336 ~ 8001340 (-) False AMCG00005704
TU193605 other downstream 235211 7785554 ~ 7788321 (-) True G153733
TU193235 other downstream 1526961 6490255 ~ 6496571 (-) True AMCG00005674
TU193087 other downstream 1940666 6081235 ~ 6082866 (-) True G153342
TU192831 other downstream 2721334 5300769 ~ 5302198 (-) True G153130
TU193709 other upstream 66036 8091748 ~ 8124685 (-) True G153806
TU194148 other upstream 1064710 9090422 ~ 9092573 (-) True G154142
TU194289 other upstream 1399578 9425290 ~ 9434940 (-) True G154250
TU194621 other upstream 2289668 10315380 ~ 10352782 (-) False AMCG00005850
TU194622 other upstream 2289668 10315380 ~ 10351719 (-) False AMCG00005850

Expression Profile