Gene
RNA
| Item | Value |
|---|---|
| RNA id | AMCG00005812 |
| length | 1188 |
| RNA type | mRNA |
| GC content | 0.64 |
| exon number | 12 |
| gene id | AMCG00005812 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030142.1 |
| NCBI id | CM030142.1 |
| chromosome length | 21087710 |
| location | 11098409 ~ 11103223 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0060339 | negative regulation of type I interferon-mediated signaling pathway | biological_process |
| GO:0032480 | negative regulation of type I interferon production | biological_process |
| GO:0005634 | nucleus | cellular_component |
| GO:0005488 | binding | molecular_function |
| id | description |
|---|---|
| K16065 | PIAS4; E3 SUMO-protein ligase PIAS4 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU194890 | lncRNA | upstream | 99020 | 10997649 ~ 10999389 (+) | True | G154722 |
| TU194697 | lncRNA | upstream | 383702 | 10690143 ~ 10714707 (+) | False | AMCG00005835 |
| TU194699 | lncRNA | upstream | 404456 | 10690143 ~ 10693953 (+) | True | AMCG00005835 |
| TU194696 | lncRNA | upstream | 430148 | 10667998 ~ 10668261 (+) | True | G154583 |
| TU194687 | lncRNA | upstream | 521972 | 10575979 ~ 10576437 (+) | True | G154574 |
| TU194957 | lncRNA | downstream | 71172 | 11174395 ~ 11180237 (+) | True | G154775 |
| TU194983 | lncRNA | downstream | 216741 | 11319964 ~ 11361770 (+) | False | G154798 |
| TU195006 | lncRNA | downstream | 258782 | 11362005 ~ 11362233 (+) | True | G154815 |
| TU195007 | lncRNA | downstream | 267201 | 11370424 ~ 11370912 (+) | True | G154816 |
| TU195024 | lncRNA | downstream | 275557 | 11378780 ~ 11379289 (+) | True | G154831 |
| AMCG00005813 | mRNA | upstream | 1041 | 11092831 ~ 11097368 (+) | True | AMCG00005813 |
| AMCG00005840 | mRNA | upstream | 88548 | 11006798 ~ 11009861 (+) | False | AMCG00005840 |
| AMCG00005869 | mRNA | upstream | 135722 | 10929794 ~ 10962687 (+) | True | AMCG00005869 |
| AMCG00005868 | mRNA | upstream | 174862 | 10919948 ~ 10923547 (+) | True | AMCG00005868 |
| AMCG00005867 | mRNA | upstream | 185737 | 10906357 ~ 10912672 (+) | True | AMCG00005867 |
| AMCG00005815 | mRNA | downstream | 36575 | 11139798 ~ 11140832 (+) | True | AMCG00005815 |
| AMCG00005816 | mRNA | downstream | 67791 | 11171014 ~ 11172074 (+) | True | AMCG00005816 |
| AMCG00005854 | mRNA | downstream | 102164 | 11205387 ~ 11206589 (+) | True | AMCG00005854 |
| AMCG00005853 | mRNA | downstream | 139616 | 11242839 ~ 11243798 (+) | True | AMCG00005853 |
| AMCG00005873 | mRNA | downstream | 221608 | 11324831 ~ 11331121 (+) | True | AMCG00005873 |
| TU194931 | other | upstream | 12398 | 11083161 ~ 11086011 (+) | True | G154756 |
| TU194894 | other | upstream | 88055 | 11007544 ~ 11010354 (+) | True | AMCG00005840 |
| TU194757 | other | upstream | 182680 | 10913397 ~ 10915729 (+) | True | G154636 |
| TU194711 | other | upstream | 368200 | 10722332 ~ 10730209 (+) | False | AMCG00005834 |
| TU194591 | other | upstream | 582019 | 10512504 ~ 10516390 (+) | True | G154499 |
| TU194985 | other | downstream | 216741 | 11319964 ~ 11325074 (+) | True | G154798 |
| TU195111 | other | downstream | 499204 | 11602427 ~ 11605275 (+) | False | AMCG00005886 |
| TU195202 | other | downstream | 800163 | 11903386 ~ 11905844 (+) | False | AMCG00005895 |
| TU195527 | other | downstream | 1588593 | 12691816 ~ 12696319 (+) | False | AMCG00005987 |
| TU195528 | other | downstream | 1589537 | 12692760 ~ 12696319 (+) | False | AMCG00005987 |
