RNA id: AMCG00005837



Basic Information


Item Value
RNA id AMCG00005837
length 225
RNA type mRNA
GC content 0.63
exon number 1
gene id AMCG00005837
representative True

Chromosome Information


Item Value
chromosome id CM030142.1
NCBI id CM030142.1
chromosome length 21087710
location 10696777 ~ 10697001 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


ATGGCCCCGCTCAGCGCCGCCTCAGACCCGCGTCACATGGGCAGCGAGCGCTTCAGACCCGCGTCACATGGGCGCCGAGCTCCGGAGCGCCTCGTACATTTTGTTAGTGTCGGAGCGGCGGACAGCGATGGTGGATCGACCCGAACTGCAGCCAGGATCTACAGTTTAACATCTGGAGCAGCACCAGCGGGGCAGACATCGGCATCAACACGAACCGTGTCGTGA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU194699 lncRNA upstream 2824 10690143 ~ 10693953 (+) True AMCG00005835
TU194696 lncRNA upstream 28516 10667998 ~ 10668261 (+) True G154583
TU194687 lncRNA upstream 120340 10575979 ~ 10576437 (+) True G154574
TU194598 lncRNA upstream 170725 10523967 ~ 10526052 (+) True G154505
TU194560 lncRNA upstream 206923 10419906 ~ 10489854 (+) False G154473
TU194890 lncRNA downstream 300648 10997649 ~ 10999389 (+) True G154722
TU194957 lncRNA downstream 477394 11174395 ~ 11180237 (+) True G154775
TU194983 lncRNA downstream 622963 11319964 ~ 11361770 (+) False G154798
TU195006 lncRNA downstream 665004 11362005 ~ 11362233 (+) True G154815
TU195007 lncRNA downstream 673423 11370424 ~ 11370912 (+) True G154816
AMCG00005835 mRNA upstream 6472 10679937 ~ 10690305 (+) False AMCG00005835
AMCG00005803 mRNA upstream 63345 10626449 ~ 10633432 (+) True AMCG00005803
AMCG00005804 mRNA upstream 73768 10615882 ~ 10623009 (+) True AMCG00005804
AMCG00005857 mRNA upstream 172946 10520856 ~ 10523831 (+) True AMCG00005857
AMCG00005856 mRNA upstream 189485 10503578 ~ 10507292 (+) True AMCG00005856
AMCG00005836 mRNA downstream 4009 10701010 ~ 10712559 (+) True AMCG00005836
AMCG00005834 mRNA downstream 24751 10721752 ~ 10736626 (+) True AMCG00005834
AMCG00005833 mRNA downstream 148535 10845536 ~ 10846858 (+) True AMCG00005833
AMCG00005826 mRNA downstream 185618 10882619 ~ 10886247 (+) True AMCG00005826
AMCG00005867 mRNA downstream 209356 10906357 ~ 10912672 (+) True AMCG00005867
TU194591 other upstream 180387 10512504 ~ 10516390 (+) True G154499
TU194578 other upstream 225146 10470543 ~ 10471631 (+) True G154486
TU194579 other upstream 228426 10462537 ~ 10468351 (+) False AMCG00005821
TU194450 other upstream 609085 10080435 ~ 10087692 (+) False AMCG00005802
TU194427 other upstream 620275 10065160 ~ 10076502 (+) False AMCG00005802
TU194711 other downstream 25331 10722332 ~ 10730209 (+) False AMCG00005834
TU194757 other downstream 216396 10913397 ~ 10915729 (+) True G154636
TU194894 other downstream 310543 11007544 ~ 11010354 (+) True AMCG00005840
TU194931 other downstream 386160 11083161 ~ 11086011 (+) True G154756
TU194985 other downstream 622963 11319964 ~ 11325074 (+) True G154798

Expression Profile